Factsheet for Zm00001d014132_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91566	Sorghum	nucleus	63.26	40.0
GSMUA_Achr5P12510_001	Banana	nucleus	45.12	39.75
Os10t0440100-00	Rice	nucleus	58.14	36.13
KXG21054	Sorghum	nucleus	47.44	35.29
TraesCS1B01G156900.1	Wheat	plastid	55.81	34.48
TraesCS1D01G139300.1	Wheat	plastid	55.81	34.48
TraesCS1A01G139700.1	Wheat	plastid	54.88	33.91
EES08854	Sorghum	nucleus	51.63	33.23
Zm00001d027709_P002	Maize	nucleus	54.88	30.57
GSMUA_Achr1P00430_001	Banana	nucleus	47.91	29.77
Zm00001d048412_P001	Maize	plastid	55.81	29.27
Zm00001d011597_P002	Maize	nucleus	24.19	20.63

Protein Annotations

Gene3D:1.10.10.10	MapMan:13.1.2.3	MapMan:15.5.10	UniProt:A0A1D6GQ63	ProteinID:AQK65310.1	ncoils:Coil
InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005667	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR036388	PFAM:PF02319	PANTHER:PTHR12548	PANTHER:PTHR12548:SF15	SMART:SM01372
SUPFAM:SSF46785	InterPro:Transcrpt_fac_DP	UniParc:UPI0008424A4F	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d014132
EnsemblPlants:Zm00001d014132_P001	EnsemblPlants:Zm00001d014132_T001	SEG:seg	:	:	:

Description

E2F-DP-transcription factor 218Transcription factor-like protein DPB

Coordinates

chr5:+:33578544..33584855

Molecular Weight (calculated)

23393.5 Da

IEP (calculated)

7.604

GRAVY (calculated)

-0.540

Length

215 amino acids

Sequence
(BLAST)

001: MFSGTGPSGG AAHSTSTGGG GGSPSDRGGP APSASASVST PASESTVARR LNGLDPHGDD APSSQPATRF ALRVVFSLFW GYVRKSKAKG EQPTMSIRKF
101: MHMTCIFQVA DELVAEFSDP NINIDSPDPD NSSAQQYDEK NIRRRVYDAL NVLMAMEIIS KDKKEIQWRG LPKTSMNDIE ELKTEVNGLK GRIDKKNAYL
201: QDLQDQVRIV WSLVS

Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)

001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN

Arabidopsis Description

DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.