Factsheet for Zm00001d011597_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87325	Sorghum	plastid	80.56	68.12
TraesCS3B01G302900.1	Wheat	nucleus, plastid	61.51	59.39
Os01t0678700-01	Rice	cytosol	69.05	59.18
TraesCS3A01G268500.1	Wheat	nucleus, plastid	60.71	58.62
TraesCS3D01G268600.1	Wheat	nucleus, plastid	60.71	58.62
Solyc09g010670.2.1	Tomato	nucleus	33.33	43.08
HORVU3Hr1G062470.2	Barley	mitochondrion	25.79	39.39
GSMUA_Achr3P16470_001	Banana	nucleus	42.06	37.99
HORVU7Hr1G037090.2	Barley	plastid	41.67	35.35
PGSC0003DMT400023036	Potato	cytosol, nucleus, plastid	36.11	35.0
AT5G02470.3	Thale cress	nucleus	32.94	28.42
CDX80823	Canola	nucleus	32.14	28.42
CDY40359	Canola	nucleus	32.14	28.03
Bra009586.1-P	Field mustard	nucleus	32.14	27.93
CDY10450	Canola	nucleus	32.14	27.74
CDY55548	Canola	nucleus	31.35	27.62
Bra005726.1-P	Field mustard	nucleus	30.95	27.56
VIT_08s0007g00170.t01	Wine grape	nucleus	39.29	26.19
Zm00001d027709_P002	Maize	nucleus	37.3	24.35
Zm00001d014132_P001	Maize	nucleus	20.63	24.19
CDY72556	Canola	cytosol	12.3	23.31
Zm00001d048412_P001	Maize	plastid	34.52	21.22

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.20.140.80	MapMan:13.1.2.3	MapMan:15.5.10	UniProt:A0A1D6G1P4	ProteinID:AQK97341.1
ncoils:Coil	InterPro:E2F-DP_heterodim	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005667	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036388	InterPro:IPR038168	PFAM:PF02319
PFAM:PF08781	PANTHER:PTHR12548	PANTHER:PTHR12548:SF14	SMART:SM01138	SMART:SM01372	SUPFAM:SSF144074
SUPFAM:SSF46785	InterPro:TF_DP_C_sf	InterPro:Transc_factor_DP_C	InterPro:Transcrpt_fac_DP	UniParc:UPI0008426F6A	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d011597	EnsemblPlants:Zm00001d011597_P002	EnsemblPlants:Zm00001d011597_T002	SEG:seg	:

Description

E2F-DP-transcription factor 29Transcription factor-like protein DPA

Coordinates

chr8:-:155439885..155445416

Molecular Weight (calculated)

28378.3 Da

IEP (calculated)

9.773

GRAVY (calculated)

-0.487

Length

252 amino acids

Sequence
(BLAST)

001: MASPCGDAAA AAELTSLRIS EGAGIPPLPG RRSVGGNAAE GEEEGDKNKK ARKGKAGTQR IAGWGLREFS KIVSKKVETK GRTTYSEVAD EICGELKLTL
101: IGQEFDEKNI RRRVYDAFNV LIALRVITKD EKEIKWMGLS NFQYEKIKLE ETRKELMIRI KNKKKLLQEI ERQFDDLQNI KFRNQFLQRP AESVNGICLP
201: FLLVKASRKA RVEIEISENS KFAGLDFNCV PFTLHDDVSI LEAIRCNSVK KS

Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)

001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN

Arabidopsis Description

DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.