Factsheet for Zm00001d027709_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 4
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95490	Sorghum	nucleus	93.78	92.35
Zm00001d048412_P001	Maize	plastid	89.38	84.15
HORVU4Hr1G072090.1	Barley	nucleus	64.25	79.74
TraesCS4B01G268800.1	Wheat	nucleus	73.06	74.41
TraesCS4A01G036000.1	Wheat	plastid	72.54	73.49
TraesCS4D01G268100.2	Wheat	nucleus	72.54	71.98
Os03t0152100-01	Rice	nucleus	19.69	71.03
GSMUA_Achr1P00430_001	Banana	nucleus	59.59	66.47
GSMUA_Achr5P12510_001	Banana	nucleus	35.23	55.74
Zm00001d014132_P001	Maize	nucleus	30.57	54.88
Zm00001d011597_P002	Maize	nucleus	24.35	37.3

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.20.140.80	EntrezGene:100283679	MapMan:13.1.2.3	MapMan:15.5.10	UniProt:A0A1D6JNY1
ncoils:Coil	InterPro:E2F-DP_heterodim	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005667	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR036388	InterPro:IPR038168	ProteinID:ONL93733.1
ProteinID:ONL93734.1	PFAM:PF02319	PFAM:PF08781	PIRSF:PIRSF009404	PANTHER:PTHR12548	PANTHER:PTHR12548:SF15
SMART:SM01138	SMART:SM01372	SUPFAM:SSF144074	SUPFAM:SSF46785	InterPro:TF_DP_C_sf	InterPro:Transc_factor_DP_C
InterPro:Transcrpt_fac_DP	UniParc:UPI00022194C2	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	EnsemblPlantsGene:Zm00001d027709	EnsemblPlants:Zm00001d027709_P002
EnsemblPlants:Zm00001d027709_T002	SEG:seg	:	:	:	:

Description

E2F-DP-transcription factor 219Transcription factor Dp-1

Coordinates

chr1:+:11671171..11678446

Molecular Weight (calculated)

41497.2 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.748

Length

386 amino acids

Sequence
(BLAST)

001: MVSGAAPNPD GGGAQNTQRP PPLTQAGART ALATPPAVSG GAAHSASTSG GSAGSPPSSR SEQHAPDGAA KGPALGAAPA AAASTPASDS TFLRLNNLDI
101: NGDDAPSSQA PTSKKKRRGT RAVGPDKGNR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFTDPNNNIE APDPDNPNAQ QYDEKNIRRR VYDALNVLMA
201: MDIISKDKKE IQWKGLPRTS ISDIEEMKTE LVGLKGRIEK KSAYLQELQD QYVGLQNLIQ RNEQSYGSGN TPSGGVALPF ILVQTRPHAT VEVEISEDMQ
301: LVHFDFNSTP FELHDDSYVL KEMRFCGREQ HDSTQESISN GGESSSVSNI YWQHVQHVER PNNGTGRLPS SPPIPGILKG RAKHEH

Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)

001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN

Arabidopsis Description

DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.