Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P12510_001 | Banana | nucleus | 55.14 | 24.18 |
| HORVU4Hr1G072090.1 | Barley | nucleus | 66.36 | 22.83 |
| Os10t0440100-00 | Rice | nucleus | 70.09 | 21.68 |
| EER95490 | Sorghum | nucleus | 72.9 | 19.9 |
| Zm00001d027709_P002 | Maize | nucleus | 71.03 | 19.69 |
| TraesCS4B01G268800.1 | Wheat | nucleus | 69.16 | 19.53 |
| TraesCS4A01G036000.1 | Wheat | plastid | 69.16 | 19.42 |
| TraesCS4D01G268100.2 | Wheat | nucleus | 69.16 | 19.02 |
| GSMUA_Achr1P00430_001 | Banana | nucleus | 59.81 | 18.5 |
| Zm00001d048412_P001 | Maize | plastid | 58.88 | 15.37 |
| Os01t0678700-01 | Rice | cytosol | 32.71 | 11.9 |
Protein Annotations
| Gene3D:1.10.10.10 | MapMan:13.1.2.3 | MapMan:15.5.10 | UniProt:A0A0N7KGL3 | ProteinID:BAS82337.1 | InterPro:E2F_WHTH_DNA-bd_dom |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005667 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR036388 | EnsemblPlantsGene:Os03g0152100 | EnsemblPlants:Os03t0152100-01 | PFAM:PF02319 | PANTHER:PTHR12548 | PANTHER:PTHR12548:SF15 |
| InterPro:Transcrpt_fac_DP | UniParc:UPI000393A7E4 | InterPro:WH-like_DNA-bd_sf | SEG:seg | : | : |
Description
E2F dimerization factorSimilar to E2F-DP transcription factor. (Os03t0152100-01)
Coordinates
chr3:+:2870376..2875830
Molecular Weight (calculated)
11352.2 Da
IEP (calculated)
5.897
GRAVY (calculated)
-0.750
Length
107 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAGAAAAST PISENTFLRL NDLDIHGDDA PSSQAPTSKK KKRGARAVGP DKGGRGLRQF SMKVCEKVES KGRTTYNEVA DELVAEFADP NNSILPPDPD
101: NPNAVEK
101: NPNAVEK
001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN
Arabidopsis Description
DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.