Factsheet for Os01t0678700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011597_P002	Maize	nucleus	59.18	69.05
TraesCS3D01G268600.1	Wheat	nucleus, plastid	58.84	66.28
TraesCS3B01G302900.1	Wheat	nucleus, plastid	58.84	66.28
TraesCS3A01G268500.1	Wheat	nucleus, plastid	58.5	65.9
OQU87325	Sorghum	plastid	57.14	56.38
HORVU3Hr1G062470.2	Barley	mitochondrion	25.17	44.85
Solyc09g010670.2.1	Tomato	nucleus	28.91	43.59
GSMUA_Achr3P16470_001	Banana	nucleus	37.07	39.07
HORVU7Hr1G037090.2	Barley	plastid	38.78	38.38
PGSC0003DMT400023036	Potato	cytosol, nucleus, plastid	31.97	36.15
Os03t0152100-01	Rice	nucleus	11.9	32.71
CDX80823	Canola	nucleus	29.93	30.88
CDY55548	Canola	nucleus	29.93	30.77
Os10t0440100-00	Rice	nucleus	35.71	30.35
Bra005726.1-P	Field mustard	nucleus	28.91	30.04
AT5G02470.3	Thale cress	nucleus	29.25	29.45
CDY40359	Canola	nucleus	28.57	29.07
Bra009586.1-P	Field mustard	nucleus	28.57	28.97
CDY10450	Canola	nucleus	28.57	28.77
VIT_08s0007g00170.t01	Wine grape	nucleus	35.37	27.51
CDY72556	Canola	cytosol	11.56	25.56

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.20.140.80	MapMan:13.1.2.3	MapMan:15.5.10	EntrezGene:4325274	EMBL:AY224529
ProteinID:BAD73471.1	ProteinID:BAF05774.1	ProteinID:BAS73680.1	ncoils:Coil	InterPro:E2F-DP_heterodim	InterPro:E2F_WHTH_DNA-bd_dom
GO:GO:0000981	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005667	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0006357	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR036388	InterPro:IPR038168	EnsemblPlantsGene:Os01g0678700	EnsemblPlants:Os01t0678700-01
PFAM:PF02319	PFAM:PF08781	PIRSF:PIRSF009404	PANTHER:PTHR12548	PANTHER:PTHR12548:SF14	UniProt:Q84VF4
SMART:SM01138	SMART:SM01372	SUPFAM:SSF144074	SUPFAM:SSF46785	InterPro:TF_DP_C_sf	InterPro:Transc_factor_DP_C
InterPro:Transcrpt_fac_DP	UniParc:UPI000005F8FC	InterPro:WH-like_DNA-bd_sf	InterPro:WH_DNA-bd_sf	RefSeq:XP_015631684.1	SEG:seg

Description

Orysa;DP1, OsDP1, DP1DP protein. (Os01t0678700-01)

Coordinates

chr1:-:27924913..27928433

Molecular Weight (calculated)

32861.4 Da

IEP (calculated)

10.254

GRAVY (calculated)

-0.619

Length

294 amino acids

Sequence
(BLAST)

001: MAPPCGDAAA AASAAPGLAN LLIREGAGLP SRPERYPPFR PCTSDSFAPI SREGDDIPPQ KKSVSLRSGG GGNAAEREEG GANRNGKKEK TGAQRITGWG
101: LREFSKIVSK KVEAKGRTTY NEVADEIFAE LKSITQNGLE FDEKNIRRRV YDAFNVLIAI RVIAKDKKEI KWMGLTNYRY EKIQKLEEVH KELITRIKNK
201: KKLLQEIEKQ FDDLQNITLR NQASQRPAES VNGILLPFLL IKTSRKARVE IEISEDSKFA RFDFNGAPFT MHDDVSILEA IRRNKGRAGL SIHP

Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)

001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN

Arabidopsis Description

DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.