Factsheet for HORVU7Hr1G037090.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G302900.1	Wheat	nucleus, plastid	46.46	52.87
TraesCS3A01G268500.1	Wheat	nucleus, plastid	44.78	50.96
TraesCS3D01G268600.1	Wheat	nucleus, plastid	44.11	50.19
HORVU3Hr1G062470.2	Barley	mitochondrion	23.91	43.03
Zm00001d011597_P002	Maize	nucleus	35.35	41.67
Os01t0678700-01	Rice	cytosol	38.38	38.78
OQU87325	Sorghum	plastid	35.35	35.23
Solyc09g010670.2.1	Tomato	nucleus	22.9	34.87
GSMUA_Achr3P16470_001	Banana	nucleus	25.59	27.24
PGSC0003DMT400023036	Potato	cytosol, nucleus, plastid	22.9	26.15
HORVU4Hr1G072090.1	Barley	nucleus	24.58	23.47
CDY40359	Canola	nucleus	20.2	20.76
CDX80823	Canola	nucleus	19.87	20.7
Bra009586.1-P	Field mustard	nucleus	20.2	20.69
CDY10450	Canola	nucleus	20.2	20.55
Bra005726.1-P	Field mustard	nucleus	19.53	20.49
CDY55548	Canola	nucleus	19.53	20.28
AT5G02470.3	Thale cress	nucleus	19.53	19.86
VIT_08s0007g00170.t01	Wine grape	nucleus	25.25	19.84
CDY72556	Canola	cytosol	4.38	9.77

Protein Annotations

Gene3D:1.10.10.10	Gene3D:1.20.140.80	MapMan:13.1.2.3	MapMan:15.5.10	UniProt:A0A287W2E3	ncoils:Coil
InterPro:E2F-DP_heterodim	InterPro:E2F_WHTH_DNA-bd_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005667
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU7Hr1G037090	EnsemblPlants:HORVU7Hr1G037090.2	InterPro:IPR036388	InterPro:IPR038168
PFAM:PF02319	PFAM:PF08781	PANTHER:PTHR12548	PANTHER:PTHR12548:SF14	SMART:SM01372	SUPFAM:SSF144074
SUPFAM:SSF46785	InterPro:TF_DP_C_sf	InterPro:Transc_factor_DP_C	InterPro:Transcrpt_fac_DP	UniParc:UPI000B47C818	InterPro:WH-like_DNA-bd_sf
InterPro:WH_DNA-bd_sf	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:87950631..87959640

Molecular Weight (calculated)

33628.6 Da

IEP (calculated)

10.889

GRAVY (calculated)

-0.792

Length

297 amino acids

Sequence
(BLAST)

001: QPRRKPRHAA YPKRASPPPL SLTPHPNPKD SNFSNLASRH RKPLAGRHPT PPLTTPSRVQ AANKHRSRPR PPPPAACRVE GSEEGEDGEA PVPDRADHAL
101: QLRPPLRLRP LPRLLPPNPR RRQIQQPQGL RAHLPGVRGF LQAPPLPAHP VCEKVEAKGR TTYNEVADEI YSELKSMAHI GQGFDEKNIR RGVYDAFNVL
201: IALRVIAKEK KEIRWMGLSN YRYEKLKKLE EVRKELVNKI RHKKALLQEI EKQFDDLQNI KLHNETLQSS AENVNGIRLP FVLVKVFFSC AATVGDA

Best Arabidopsis Sequence Match ( AT5G03415.1 )
(BLAST)

001: MTTTGSNSNH NHHESNNNNN NPSTRSWGTA VSGQSVSTSG SMGSPSSRSE QTITVVTSTS DTTFQRLNNL DIQGDDAGSQ GASGVKKKKR GQRAAGPDKT
101: GRGLRQFSMK VCEKVESKGR TTYNEVADEL VAEFALPNND GTSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTSLSD IEELKNERLS
201: LRNRIEKKTA YSQELEEQYV GLQNLIQRNE HLYSSGNAPS GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNFVLKTM KFCDQPPQQP
301: NGRNNSQLVC HNFTPENPNK GPSTGPTPQL DMYETHLQSQ QHQQHSQLQI IPMPETNNVT SSADTAPVKS PSLPGIMNSS MKPEN

Arabidopsis Description

DPBTranscription factor-like protein DPB [Source:UniProtKB/Swiss-Prot;Acc:Q9FNY2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.