Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G116100.1 | Wheat | cytosol | 89.6 | 91.65 |
| OQU90455 | Sorghum | cytosol, mitochondrion | 37.38 | 37.38 |
| TraesCS1A01G112700.1 | Wheat | cytosol | 31.68 | 33.25 |
| TraesCS3A01G095300.1 | Wheat | cytosol | 33.17 | 32.13 |
| CDY52140 | Canola | cytosol | 29.46 | 31.57 |
| Bra005844.1-P | Field mustard | cytosol | 29.21 | 31.3 |
| CDX80950 | Canola | cytosol | 29.21 | 31.3 |
| AT5G05150.1 | Thale cress | cytosol | 28.96 | 31.28 |
| TraesCS3A01G453200.1 | Wheat | cytosol | 33.66 | 27.87 |
| TraesCS6A01G353600.1 | Wheat | cytosol, mitochondrion, plastid | 17.82 | 19.3 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G115200.1 | EnsemblPlantsGene:TraesCS2A01G115200 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR11227 | PANTHER:PTHR11227:SF30 | PFAM:PF00400 | SEG:seg |
| SMART:SM00320 | SUPFAM:SSF50978 | MapMan:19.3.2.1.3 | : | : | : |
Description
No Description!
Coordinates
chr2A:-:65682724..65685777
Molecular Weight (calculated)
43107.3 Da
IEP (calculated)
7.648
GRAVY (calculated)
-0.102
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSSSFPAA TAEADSPIVQ VAFSSGASHF VASTATGFHV FSCDDDKVER VHYKSDAVAS PGVVVTSTEL LTRSRVAVVT RTTGAVKGAA EHHAIYFWDE
101: ESGEAKQIAI GSASTPDLGP VGGLRLLGDH VLVAGQQMAM LVINGDLKSR KLVQTGPNPL GLCALAVDQE TRLVCALPRP EKGAVQVRRT GKPGSVDVHA
201: HASSLSCIAL SRDGRLLATA GSKGTLVRIF STDDGAMVQE LRRGIDRADI HCIAFSPDFR WLAVSSDKGT VHVFPVASID KATSTMAGGD RDALLVAPSR
301: AAASPPPPAA SKQGSLLPSF LKGYLPSYFS SERSLAQVRL REGVEYAVEF WRHHPNIILI VGTDGSFYRC GFDPLNTGEM KQLEHKRFMK IKESEDNQRV
401: QSET
101: ESGEAKQIAI GSASTPDLGP VGGLRLLGDH VLVAGQQMAM LVINGDLKSR KLVQTGPNPL GLCALAVDQE TRLVCALPRP EKGAVQVRRT GKPGSVDVHA
201: HASSLSCIAL SRDGRLLATA GSKGTLVRIF STDDGAMVQE LRRGIDRADI HCIAFSPDFR WLAVSSDKGT VHVFPVASID KATSTMAGGD RDALLVAPSR
301: AAASPPPPAA SKQGSLLPSF LKGYLPSYFS SERSLAQVRL REGVEYAVEF WRHHPNIILI VGTDGSFYRC GFDPLNTGEM KQLEHKRFMK IKESEDNQRV
401: QSET
001: MSSTVSNPQG ILQPGSFLLP ESESMKKEEA ELVSVCWNQD SSCFAAGTSH GFRIYNCEPF KETFRRELKD GGFKIVEMLF RSNILALVGG GPNSQYPSSK
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
Arabidopsis Description
ATG18CAutophagy-related protein 18c [Source:UniProtKB/Swiss-Prot;Acc:Q8GYD7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.