Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G115200.1 | Wheat | cytosol | 91.65 | 89.6 |
| TraesCS2D01G119500.1 | Wheat | plastid | 76.2 | 78.8 |
| OQU90455 | Sorghum | cytosol, mitochondrion | 39.75 | 38.86 |
| TraesCS1D01G114300.1 | Wheat | cytosol | 32.91 | 33.77 |
| TraesCS3D01G095500.1 | Wheat | cytosol | 34.94 | 33.09 |
| CDY52140 | Canola | cytosol | 30.13 | 31.57 |
| AT5G05150.1 | Thale cress | cytosol | 29.87 | 31.55 |
| Bra005844.1-P | Field mustard | cytosol | 29.87 | 31.3 |
| CDX80950 | Canola | cytosol | 29.87 | 31.3 |
| TraesCS6D01G335900.1 | Wheat | cytosol, mitochondrion, plastid | 18.48 | 19.57 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G116100.1 | EnsemblPlantsGene:TraesCS2D01G116100 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR11227 |
| PANTHER:PTHR11227:SF30 | PFAM:PF00400 | SEG:seg | SMART:SM00320 | SUPFAM:SSF50978 | MapMan:19.3.2.1.3 |
Description
No Description!
Coordinates
chr2D:-:64597245..64601888
Molecular Weight (calculated)
41957.1 Da
IEP (calculated)
7.919
GRAVY (calculated)
-0.037
Length
395 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSPSSSPA APAEADSPIV HVAFSSGTSH FVASAATGFH VFSCDDDKVE RVHYKSDAVA SPGVVVTSAE LLTRSRVAVV TQMAGAVKGA AEHHAIYFWD
101: EESGEAKQIA IGSTKTPDLG PVGGLRLLGG HVLVAGQQMA MLVISGDLKS RKLVQTGPNP LGLCALAVDQ ETRLVCALPR PEKGAVQVRR TGKPGSVDVR
201: AHASSLSCIA LSRDGRLLAT AGSKGTLVRI FSTDDGTMLQ ELRRGIDRAD IHCIAFSPDF RWLAVSSDKG TVHVFPVASV DKATLTMEGG DGDALLVAPS
301: RAAAFPPAPA AAKQGSLLPS FLKGYLPSYF SSERSLAQVR LREGVEYAVE FWRHHPNTIL IAGTDGSFYR CRFDPVNAGE MKQLEHERFI KKINE
101: EESGEAKQIA IGSTKTPDLG PVGGLRLLGG HVLVAGQQMA MLVISGDLKS RKLVQTGPNP LGLCALAVDQ ETRLVCALPR PEKGAVQVRR TGKPGSVDVR
201: AHASSLSCIA LSRDGRLLAT AGSKGTLVRI FSTDDGTMLQ ELRRGIDRAD IHCIAFSPDF RWLAVSSDKG TVHVFPVASV DKATLTMEGG DGDALLVAPS
301: RAAAFPPAPA AAKQGSLLPS FLKGYLPSYF SSERSLAQVR LREGVEYAVE FWRHHPNTIL IAGTDGSFYR CRFDPVNAGE MKQLEHERFI KKINE
001: MSSTVSNPQG ILQPGSFLLP ESESMKKEEA ELVSVCWNQD SSCFAAGTSH GFRIYNCEPF KETFRRELKD GGFKIVEMLF RSNILALVGG GPNSQYPSSK
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
Arabidopsis Description
ATG18CAutophagy-related protein 18c [Source:UniProtKB/Swiss-Prot;Acc:Q8GYD7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.