Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G134400.1 | Wheat | cytosol | 70.16 | 83.75 |
| TraesCS2D01G116100.1 | Wheat | cytosol | 78.8 | 76.2 |
| OQU90455 | Sorghum | cytosol, mitochondrion | 40.84 | 38.61 |
| TraesCS1D01G114300.1 | Wheat | cytosol | 34.03 | 33.77 |
| TraesCS3D01G095500.1 | Wheat | cytosol | 36.39 | 33.33 |
| CDY52140 | Canola | cytosol | 30.37 | 30.77 |
| Bra005844.1-P | Field mustard | cytosol | 30.1 | 30.5 |
| CDX80950 | Canola | cytosol | 30.1 | 30.5 |
| AT5G05150.1 | Thale cress | cytosol | 29.84 | 30.48 |
| TraesCS6D01G335900.1 | Wheat | cytosol, mitochondrion, plastid | 18.85 | 19.3 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G119500.1 | EnsemblPlantsGene:TraesCS2D01G119500 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR11227 |
| PANTHER:PTHR11227:SF30 | PFAM:PF00400 | SEG:seg | SMART:SM00320 | SUPFAM:SSF50978 | MapMan:19.3.2.1.3 |
Description
No Description!
Coordinates
chr2D:-:68856813..68858690
Molecular Weight (calculated)
40832.4 Da
IEP (calculated)
7.094
GRAVY (calculated)
-0.062
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSSSSPAA SAEADSPIVH VAFSSGASHF VASTATGFHV FSCDESVERV RYKSIADVSD GAEVTSAEML TWSRLAVVTR ETGGAEHEAI YFFDESKKAI
101: RISSDKTPGL GVVGGIRLLG DRALIAGQKM AMLVLRGHIK NSELVATGPN PLGLCALAVD RRAATFMYAL PRPEKGAVQV CRSGQLGSVD VRAHASSLSC
201: IALSRDGRLL ATAGSKGTLV RIFSTDDGTM VQELRRGIDR ADIHCIAFSL ESQWLAVSSD KGTVHVFPVA SVNKATEGGG DDSDNMPVTP PAAAAAAATA
301: KQGSSLSFLK GYLPSYFSSE WSLAQVRLRE GVDYTVEFWR HHPNTILIAG TDGSFYRCRF DPVNAGEMKE LEHERFIKKI KE
101: RISSDKTPGL GVVGGIRLLG DRALIAGQKM AMLVLRGHIK NSELVATGPN PLGLCALAVD RRAATFMYAL PRPEKGAVQV CRSGQLGSVD VRAHASSLSC
201: IALSRDGRLL ATAGSKGTLV RIFSTDDGTM VQELRRGIDR ADIHCIAFSL ESQWLAVSSD KGTVHVFPVA SVNKATEGGG DDSDNMPVTP PAAAAAAATA
301: KQGSSLSFLK GYLPSYFSSE WSLAQVRLRE GVDYTVEFWR HHPNTILIAG TDGSFYRCRF DPVNAGEMKE LEHERFIKKI KE
001: MSSTVSNPQG ILQPGSFLLP ESESMKKEEA ELVSVCWNQD SSCFAAGTSH GFRIYNCEPF KETFRRELKD GGFKIVEMLF RSNILALVGG GPNSQYPSSK
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
101: VLIWDDHQSR CISEFAFRSE IRAVKLRRDR IVVVLEHKIY VYNFMDLRLL HQIETQANPR GLCCLSHHSN TSVLACPGLN RGEIRVEHFG LNMVQIINAH
201: DSSIACMTLT LDGLLLATAS TKGTLIRIFN TMDGTRLQEV RRGVDRADIY SIALSPNVQW LAVSSDKGTV HIFSLRVRVV GEDSYSTENG ALLTQQNYSN
301: SLQGLVSPTI GTNPGSSLSF MRGVLPKYFS SEWSYAQFHV SEVTQFFAAF GSNNTVAIIG MDGSFYRCSF DPVNGGEMGQ LEYIHFMKMD NRP
Arabidopsis Description
ATG18CAutophagy-related protein 18c [Source:UniProtKB/Swiss-Prot;Acc:Q8GYD7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.