Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G119500.1 | Wheat | plastid | 83.75 | 70.16 |
| TraesCS2B01G134500.1 | Wheat | cytosol | 49.38 | 39.8 |
| TraesCS2B01G134900.1 | Wheat | cytosol | 50.31 | 38.42 |
| TraesCS3B01G110900.1 | Wheat | cytosol | 35.0 | 26.86 |
| AT5G05150.1 | Thale cress | cytosol | 30.94 | 26.47 |
| TraesCS4B01G179000.2 | Wheat | plastid | 38.12 | 26.46 |
| CDX80950 | Canola | cytosol | 30.62 | 25.99 |
| CDY52140 | Canola | cytosol | 30.62 | 25.99 |
| TraesCS1B01G132900.1 | Wheat | cytosol | 31.25 | 25.97 |
| Bra005844.1-P | Field mustard | cytosol | 30.31 | 25.73 |
| TraesCS3B01G490900.1 | Wheat | nucleus | 33.12 | 21.46 |
| TraesCS6B01G386200.1 | Wheat | cytosol, mitochondrion, plastid | 20.94 | 17.96 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G134400.1 | EnsemblPlantsGene:TraesCS2B01G134400 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR11227 |
| PANTHER:PTHR11227:SF30 | PFAM:PF00400 | SEG:seg | SMART:SM00320 | SUPFAM:SSF50978 | MapMan:19.3.2.1.3 |
Description
No Description!
Coordinates
chr2B:-:100848132..100849693
Molecular Weight (calculated)
33925.3 Da
IEP (calculated)
7.599
GRAVY (calculated)
-0.112
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTSSSPAG PAEADSPVVH VPFSGGASHF VASTTTGFHV FSCGESVERV RYKSIADVSY GAEVTSAEML TWSRLAVVTR KTGGAEHDAI YFFDEESKRT
101: IRISSAKTPS LGVVGGVRLL GDHAIIAGQE MAMLVVRGDI KNSELVETGP NPLGLCALAV DRREATYALP RPEKGAVVDV RAHGSGVACL ALSRDGRLLA
201: TAGSKGTLVR IFSTDDGTKL QELRRGIDRA DIHCIVLSSD SRWLAVSSDK GTVHVFPVSS ADKATKAGAD SDTLPVTPPA TAPVPATAKQ GSFYRCRFDP
301: VNAGEMKQLE HERFIKKINE
101: IRISSAKTPS LGVVGGVRLL GDHAIIAGQE MAMLVVRGDI KNSELVETGP NPLGLCALAV DRREATYALP RPEKGAVVDV RAHGSGVACL ALSRDGRLLA
201: TAGSKGTLVR IFSTDDGTKL QELRRGIDRA DIHCIVLSSD SRWLAVSSDK GTVHVFPVSS ADKATKAGAD SDTLPVTPPA TAPVPATAKQ GSFYRCRFDP
301: VNAGEMKQLE HERFIKKINE
001: MDPRRNFQPG GYDSRNTFTS GSFGPPDFGE SDEAELVSVS WNQDYSCFAA GTSHGFRIYN CEPFKETFRR ELKDGGFKIV EMLFRSNILA LVGGGPNSQY
101: PSNKVLIWDD HQGRCISEFT FRSEIRAVKL RRDRIVVVLE HKIYVYNFMD LRLLHQIENM ANPRGLCCLS HHMNTSVLAC PGIRRGEVRV EHFGLNMVQI
201: INAHDSNIAC MTLTLDGLLL ATASTKGTLI RIFNTMDGTR LQEVRRGVDR ADIYSIALSP NVQWLAVSSD KGTVHIFSLR VRVIGEDAYS TEHETSSNSL
301: QPLVSPASGA NPGSSLSFLR GVLPKYFSSE WSFSQFHVPE VTQYFAAFGA QNTIAIIGLD GSFYRCNFDP VNGGEMTQLE HFHFLKQDSP R
101: PSNKVLIWDD HQGRCISEFT FRSEIRAVKL RRDRIVVVLE HKIYVYNFMD LRLLHQIENM ANPRGLCCLS HHMNTSVLAC PGIRRGEVRV EHFGLNMVQI
201: INAHDSNIAC MTLTLDGLLL ATASTKGTLI RIFNTMDGTR LQEVRRGVDR ADIYSIALSP NVQWLAVSSD KGTVHIFSLR VRVIGEDAYS TEHETSSNSL
301: QPLVSPASGA NPGSSLSFLR GVLPKYFSSE WSFSQFHVPE VTQYFAAFGA QNTIAIIGLD GSFYRCNFDP VNGGEMTQLE HFHFLKQDSP R
Arabidopsis Description
ATG18DAutophagy-related protein 18d [Source:UniProtKB/Swiss-Prot;Acc:Q0WPK3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.