Factsheet for TraesCS3A01G181400.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G186200.1	Wheat	plastid	97.76	98.42
TraesCS3B01G211400.1	Wheat	plastid	97.99	97.99
EES00532	Sorghum	plastid	85.23	85.62
Os01t0265000-00	Rice	plastid	87.25	85.34
Zm00001d040356_P001	Maize	mitochondrion, plastid	82.77	83.15
GSMUA_Achr6P32200_001	Banana	plastid	68.46	65.67
KRH73442	Soybean	plastid	60.18	60.04
Solyc01g088310.2.1	Tomato	plastid	59.28	58.76
VIT_06s0009g01740.t01	Wine grape	plastid	60.63	58.15
TraesCS6A01G307700.1	Wheat	plastid	55.7	53.9
PGSC0003DMT400017587	Potato	plastid	26.62	51.97

Protein Annotations

KEGG:00900+1.3.1.83	Gene3D:3.50.50.60	MapMan:7.12.6.6.3	InterPro:BchP_ChlP_pln/prok	InterPro:FAD-bd	InterPro:FAD/NAD-bd_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016628	GO:GO:0045550
GO:GO:0051188	GO:GO:0055114	GO:GO:0071949	InterPro:Geranylgeranyl_Rdtase_fam	InterPro:Geranylgeranyl_Rdtase_pln/cyn	InterPro:IPR036188
PFAM:PF01494	PRINTS:PR00420	PANTHER:PTHR42685	PANTHER:PTHR42685:SF5	SUPFAM:SSF51905	TIGRFAMs:TIGR02023
TIGRFAMs:TIGR02028	TIGRFAMs:TIGR02032	EnsemblPlantsGene:TraesCS3A01G181400	EnsemblPlants:TraesCS3A01G181400.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:+:209602410..209603753

Molecular Weight (calculated)

47956.9 Da

IEP (calculated)

8.939

GRAVY (calculated)

-0.045

Length

447 amino acids

Sequence
(BLAST)

001: MATMAAAVCH SPARLSISCS YSSSHSAPAR PLRVAVVGGG PAGASAAEAL ASAGAQAFLL ERSPAGAKPC GGAIPLCMLD EFAIPLGLVD RRVTRMRVLS
101: PSNLAADFGR SLPPGAHIPM LRREVLDSFL RTRAADAGAT LVPGLVTSLS LPAGPTDPYL VHYISSGDGP SPTRSVLEVD AVVGADGANS RVAREVGAGD
201: YSTAIAFQER IRLPDKAMEY YDDLAEMYVG GDVSPDFYGW VFPKCDHVAV GTGTVAAKPE IKKLQSGIRA RAGPKIAGGR VIKVEAHPIP EHPRPRRVVG
301: RVALVGDAAG YVTRCSGEGI YFAAKSGRLC GQAMAKEWRL TGAVTEGGIR RGYLRRWDDE FLLTFRFLDL LQRVFYGDNA GREALVEMCA DEHVQRRTFD
401: CYLHKRMAPG EPWADLQLLW RTAGSMVRCS VLGKEVQRLR RLELLQA

Best Arabidopsis Sequence Match ( AT1G74470.1 )
(BLAST)

001: MATTVTLKSF TGLRQSSTEQ TNFVSHVPSS LSLPQRRTSL RVTAARATPK LSNRKLRVAV IGGGPAGGAA AETLAQGGIE TILIERKMDN CKPCGGAIPL
101: CMVGEFNLPL DIIDRRVTKM KMISPSNIAV DIGRTLKEHE YIGMVRREVL DAYLRERAEK SGATVINGLF LKMDHPENWD SPYTLHYTEY DGKTGATGTK
201: KTMEVDAVIG ADGANSRVAK SIDAGDYDYA IAFQERIRIP DEKMTYYEDL AEMYVGDDVS PDFYGWVFPK CDHVAVGTGT VTHKGDIKKF QLATRNRAKD
301: KILGGKIIRV EAHPIPEHPR PRRLSKRVAL VGDAAGYVTK CSGEGIYFAA KSGRMCAEAI VEGSQNGKKM IDEGDLRKYL EKWDKTYLPT YRVLDVLQKV
401: FYRSNPAREA FVEMCNDEYV QKMTFDSYLY KRVAPGSPLE DIKLAVNTIG SLVRANALRR EIEKLSV

Arabidopsis Description

CHLPGeranylgeranyl diphosphate reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.