Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- peroxisome 1
- mitochondrion 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc01g088310.2.1 | Tomato | plastid | 83.41 | 42.35 |
| VIT_06s0009g01740.t01 | Wine grape | plastid | 64.63 | 31.76 |
| KRH73442 | Soybean | plastid | 61.57 | 31.47 |
| EES00532 | Sorghum | plastid | 54.59 | 28.09 |
| TraesCS3D01G186200.1 | Wheat | plastid | 52.84 | 27.25 |
| TraesCS3B01G211400.1 | Wheat | plastid | 52.84 | 27.07 |
| GSMUA_Achr6P32200_001 | Banana | plastid | 55.02 | 27.04 |
| Zm00001d040356_P001 | Maize | mitochondrion, plastid | 52.4 | 26.97 |
| TraesCS3A01G181400.1 | Wheat | plastid | 51.97 | 26.62 |
| Os01t0265000-00 | Rice | plastid | 51.97 | 26.04 |
| PGSC0003DMT400050234 | Potato | plastid | 51.53 | 25.43 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400017587 | EnsemblPlantsGene:PGSC0003DMG400006822 | Gene3D:3.50.50.60 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0071949 | InterPro:FAD-bd | InterPro:FAD/NAD-bd_sf | InterPro:IPR036188 | PANTHER:PTHR42685 | PANTHER:PTHR42685:SF5 |
| PFAM:PF01494 | PGSC:PGSC0003DMG400006822 | PRINTS:PR00420 | SEG:seg | SUPFAM:SSF51905 | UniParc:UPI0002952E19 |
| UniProt:M1A952 | MapMan:35.1 | : | : | : | : |
Description
Geranylgeranyl hydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400006822]
Coordinates
chr1:-:64375378..64376946
Molecular Weight (calculated)
25112.9 Da
IEP (calculated)
9.935
GRAVY (calculated)
-0.008
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQTYLQLH PLRCLPFPLK IQNPQNQTHH FKQKPRNPVV CKLRVAVIGG GPAGSSAAEA LATGGIETFL FERSPATAKP CGGAIPLCML DEFSIPLNLI
101: DRRVIQMRIV SPSNLVVDFG KTLKPHEFIA MLRREVLDSF LRQRAESSGA TLLKALVTNL VVPTSTREPY VIHYTMDNCQ HQLAVDVIIG ADGANSRVAK
201: SIKAGNYTTA IAFQERIKLP EDKMGITKI
101: DRRVIQMRIV SPSNLVVDFG KTLKPHEFIA MLRREVLDSF LRQRAESSGA TLLKALVTNL VVPTSTREPY VIHYTMDNCQ HQLAVDVIIG ADGANSRVAK
201: SIKAGNYTTA IAFQERIKLP EDKMGITKI
001: MATTVTLKSF TGLRQSSTEQ TNFVSHVPSS LSLPQRRTSL RVTAARATPK LSNRKLRVAV IGGGPAGGAA AETLAQGGIE TILIERKMDN CKPCGGAIPL
101: CMVGEFNLPL DIIDRRVTKM KMISPSNIAV DIGRTLKEHE YIGMVRREVL DAYLRERAEK SGATVINGLF LKMDHPENWD SPYTLHYTEY DGKTGATGTK
201: KTMEVDAVIG ADGANSRVAK SIDAGDYDYA IAFQERIRIP DEKMTYYEDL AEMYVGDDVS PDFYGWVFPK CDHVAVGTGT VTHKGDIKKF QLATRNRAKD
301: KILGGKIIRV EAHPIPEHPR PRRLSKRVAL VGDAAGYVTK CSGEGIYFAA KSGRMCAEAI VEGSQNGKKM IDEGDLRKYL EKWDKTYLPT YRVLDVLQKV
401: FYRSNPAREA FVEMCNDEYV QKMTFDSYLY KRVAPGSPLE DIKLAVNTIG SLVRANALRR EIEKLSV
101: CMVGEFNLPL DIIDRRVTKM KMISPSNIAV DIGRTLKEHE YIGMVRREVL DAYLRERAEK SGATVINGLF LKMDHPENWD SPYTLHYTEY DGKTGATGTK
201: KTMEVDAVIG ADGANSRVAK SIDAGDYDYA IAFQERIRIP DEKMTYYEDL AEMYVGDDVS PDFYGWVFPK CDHVAVGTGT VTHKGDIKKF QLATRNRAKD
301: KILGGKIIRV EAHPIPEHPR PRRLSKRVAL VGDAAGYVTK CSGEGIYFAA KSGRMCAEAI VEGSQNGKKM IDEGDLRKYL EKWDKTYLPT YRVLDVLQKV
401: FYRSNPAREA FVEMCNDEYV QKMTFDSYLY KRVAPGSPLE DIKLAVNTIG SLVRANALRR EIEKLSV
Arabidopsis Description
CHLPGeranylgeranyl diphosphate reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA67]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.