Factsheet for Os01t0265000-00

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 21433289

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G181400.1	Wheat	plastid	85.34	87.25
TraesCS3D01G186200.1	Wheat	plastid	84.25	86.71
TraesCS3B01G211400.1	Wheat	plastid	84.68	86.58
EES00532	Sorghum	plastid	83.59	85.84
Zm00001d040356_P001	Maize	mitochondrion, plastid	81.62	83.82
GSMUA_Achr6P32200_001	Banana	plastid	66.52	65.24
KRH73442	Soybean	plastid	59.08	60.27
Solyc01g088310.2.1	Tomato	plastid	56.89	57.65
VIT_06s0009g01740.t01	Wine grape	plastid	57.55	56.44
Os02t0744900-01	Rice	plastid	53.61	52.92
PGSC0003DMT400017587	Potato	plastid	26.04	51.97

Protein Annotations

KEGG:00900+1.3.1.83	Gene3D:3.50.50.60	EntrezGene:4326207	MapMan:7.12.6.6.3	ProteinID:BAD81184.1	ProteinID:BAD81258.1
ProteinID:BAF04581.1	ProteinID:BAS71455.1	InterPro:BchP_ChlP_pln/prok	InterPro:FAD-bd	InterPro:FAD/NAD-bd_sf	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006139	GO:GO:0006397	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995	GO:GO:0016628
GO:GO:0045550	GO:GO:0051188	GO:GO:0055114	GO:GO:0071949	InterPro:Geranylgeranyl_Rdtase_fam	InterPro:Geranylgeranyl_Rdtase_pln/cyn
InterPro:IPR036188	EnsemblPlantsGene:Os01g0265000	EnsemblPlants:Os01t0265000-00	PFAM:PF01494	PRINTS:PR00420	PANTHER:PTHR42685
PANTHER:PTHR42685:SF5	UniProt:Q5NB98	SUPFAM:SSF51905	TIGRFAMs:TIGR02023	TIGRFAMs:TIGR02028	TIGRFAMs:TIGR02032
UniParc:UPI000049E6BC	RefSeq:XP_015611288.1	SEG:seg	:	:	:

Description

LIGHT-INDUCED YELLOW LEAF 2Aromatic-ring hydroxylase-like domain containing protein. (Os01t0265000-00)

Coordinates

chr1:+:9018169..9019584

Molecular Weight (calculated)

49092.0 Da

IEP (calculated)

8.960

GRAVY (calculated)

-0.082

Length

457 amino acids

Sequence
(BLAST)

001: MAAAVAAAAC HSPARLVVTC SSSATPAPPR RPLRVAVVGG GPAGASAAEA LASAGAQAFL LERNPSGAKP CGGAIPLCML DEFAIPRDLV DRRVTRMRVL
101: SPSNLAADFS RALPPGAHIP MLRREVLDSF LRRRAADAGA TLVPGLVTSL SLPADPATDP YLVHYISSDS GGPSSSRCVL EVDAVIGADG ANSRVAREVG
201: AGDYSTAIAF QERIRLPDEA MAYYDDLAEM YVGGDVSPDF YGWVFPKCDH VAVGTGTVAA KPEIKRLQSG IRARAAGKVA GGRVVRVEAH PIPEHPRPRR
301: VVGRVALVGD AAGYVTRCSG EGIYFAARSG RLCGRAMADE WRLTGAVTEA GIRAGYLRRW DDEFRPTFRF LDLLQRVFYG GNAGREALVE MCADEHVQRR
401: TFDSYLHKRM APAEPWGDLR LLWRTAAAMV RCGVLGREVE RLRRLEQQAA DQVLLRH

Best Arabidopsis Sequence Match ( AT1G74470.1 )
(BLAST)

001: MATTVTLKSF TGLRQSSTEQ TNFVSHVPSS LSLPQRRTSL RVTAARATPK LSNRKLRVAV IGGGPAGGAA AETLAQGGIE TILIERKMDN CKPCGGAIPL
101: CMVGEFNLPL DIIDRRVTKM KMISPSNIAV DIGRTLKEHE YIGMVRREVL DAYLRERAEK SGATVINGLF LKMDHPENWD SPYTLHYTEY DGKTGATGTK
201: KTMEVDAVIG ADGANSRVAK SIDAGDYDYA IAFQERIRIP DEKMTYYEDL AEMYVGDDVS PDFYGWVFPK CDHVAVGTGT VTHKGDIKKF QLATRNRAKD
301: KILGGKIIRV EAHPIPEHPR PRRLSKRVAL VGDAAGYVTK CSGEGIYFAA KSGRMCAEAI VEGSQNGKKM IDEGDLRKYL EKWDKTYLPT YRVLDVLQKV
401: FYRSNPAREA FVEMCNDEYV QKMTFDSYLY KRVAPGSPLE DIKLAVNTIG SLVRANALRR EIEKLSV

Arabidopsis Description

CHLPGeranylgeranyl diphosphate reductase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA67]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.