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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
ChloroP:plastid
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G068540.1 Barley cytosol, plastid 89.56 89.56
TraesCS4D01G249100.1 Wheat cytosol, plastid 86.75 86.75
TraesCS4B01G249000.1 Wheat cytosol, plastid 84.74 84.74
Os03t0212400-01 Rice cytosol 66.67 68.03
Zm00001d028197_P001 Maize plastid 61.85 63.37
EER95289 Sorghum cytosol 62.25 63.27
TraesCS2A01G181400.1 Wheat plastid 49.8 47.15
TraesCS3A01G391300.1 Wheat cytosol 44.18 42.97
GSMUA_AchrUn_... Banana cytosol 17.27 41.35
TraesCS2A01G180800.1 Wheat nucleus, plastid 42.17 40.08
TraesCS7A01G049300.1 Wheat nucleus, plastid 45.78 39.18
TraesCS4A01G435200.1 Wheat cytosol, plastid 46.18 36.74
Protein Annotations
EnsemblPlants:TraesCS4A01G055800.1EnsemblPlantsGene:TraesCS4A01G055800Gene3D:1.20.5.110InterPro:IPR000727InterPro:T_SNARE_domPANTHER:PTHR19305
PANTHER:PTHR19305:SF13PFscan:PS50192SEG:segSMART:SM00397SUPFAM:SSF58038TIGR:cd15841
MapMan:22.7.3.1:::::
Description
No Description!
Coordinates
chr4A:+:46551159..46554151
Molecular Weight (calculated)
27867.5 Da
IEP (calculated)
8.521
GRAVY (calculated)
-0.910
Length
249 amino acids
Sequence
(BLAST)
001: MSVSMNMRQN SVSTPIRRTT NPFDSDSDSE VPSRPSRAQS APTQHTNQSV QELEDYTLRK AEETSSKAND CVRAAEAIRE DATQILLTLH RQGEQITHTH
101: RVAADIEHDL TMSEKLLGSL GGLFSKTWRP KRNQHIKGPV SQNSSFKSTT NQMEQRQNLG IGSRPQQFPS SVHSAPATAM NKIKAEKARQ DDAFADLSNM
201: LENLKDMALD MGTEIDRQNK SLDTFSDDVD ELNFRVKGAN QRGRRLLGK
Best Arabidopsis Sequence Match ( AT1G13890.1 )
(BLAST)
001: MFGFFKSPGN NKLPNESSNN KGGTITAGRR TSSEPILITP DFDDDDKYKN GFNDSGGLQS QTTEELEKYA VYKAEETTKG VNNCLKIAED IRSDGARTLE
101: MLHQQGEQIN RTHEMAVDMD KDLSRGEKLL NNLGGMFSKP WKPKKTKNIT GPMITPDKPS KKSENHKEER EKLGLGAKGR SSSQPALDQP TNALQKVEQE
201: KAKQDDGLSD LSDILGDLKS MAVDMGSEID KQNKALDHLG DDVDELNSRV QGANQRARHL LSK
Arabidopsis Description
SNAP30Putative SNAP25 homologous protein SNAP30 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMG8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.