Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G369100.1 | Wheat | plasma membrane | 83.83 | 80.0 |
| KXG36173 | Sorghum | extracellular | 60.48 | 60.84 |
| Os09t0557900-01 | Rice | extracellular | 60.48 | 60.12 |
| Zm00001d021391_P001 | Maize | extracellular | 58.68 | 58.33 |
| GSMUA_Achr7P05270_001 | Banana | extracellular | 49.1 | 47.67 |
| Solyc03g117560.2.1 | Tomato | extracellular | 46.71 | 46.99 |
| VIT_09s0018g00520.t01 | Wine grape | extracellular | 46.71 | 46.43 |
| KRH47324 | Soybean | extracellular | 46.11 | 45.29 |
| PGSC0003DMT400073746 | Potato | extracellular | 44.91 | 43.86 |
| Solyc12g042580.1.1 | Tomato | extracellular | 42.52 | 43.03 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 29.34 | 29.7 |
| TraesCS3B01G334700.1 | Wheat | extracellular | 17.96 | 27.27 |
| TraesCS2B01G279700.1 | Wheat | unclear | 29.94 | 25.51 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G362200.1 | EnsemblPlantsGene:TraesCS5B01G362200 | Gene3D:2.60.40.420 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0009055 |
| InterPro:Cupredoxin | InterPro:IPR003245 | InterPro:IPR008972 | InterPro:Phytocyanin_dom | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF13 |
| PFAM:PD003122 | PFAM:PF02298 | PFscan:PS51257 | PFscan:PS51485 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF49503 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:541616238..541616870
Molecular Weight (calculated)
17092.2 Da
IEP (calculated)
4.835
GRAVY (calculated)
0.310
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MASKALLLAV AVAVAAGCAD ATDHIVGANR GWNPNINYSG WSANQTFYAG DLISFRYQKG THNVFAVNET GYDNCTMAGV TGNWTSGKDF IPLPDPGTYF
101: FICGNGFCQA GMKVAITVAP GIFDLGPQIY PPPAPGADNP SASFTAGAWP AAAAVVTALG AAAIIAL
101: FICGNGFCQA GMKVAITVAP GIFDLGPQIY PPPAPGADNP SASFTAGAWP AAAAVVTALG AAAIIAL
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.