Factsheet for VIT_09s0018g00520.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH47324	Soybean	extracellular	64.29	63.53
Solyc03g117560.2.1	Tomato	extracellular	57.74	58.43
GSMUA_Achr7P05270_001	Banana	extracellular	56.55	55.23
PGSC0003DMT400073746	Potato	extracellular	54.17	53.22
Solyc12g042580.1.1	Tomato	extracellular	51.79	52.73
KXG36173	Sorghum	extracellular	50.0	50.6
Zm00001d021391_P001	Maize	extracellular	50.0	50.0
Os09t0557900-01	Rice	extracellular	49.4	49.4
TraesCS5D01G369100.1	Wheat	plasma membrane	48.81	46.86
TraesCS5B01G362200.1	Wheat	extracellular, plasma membrane, vacuole	46.43	46.71
VIT_14s0108g01320.t01	Wine grape	extracellular	33.33	35.22
VIT_14s0108g01310.t01	Wine grape	extracellular, plasma membrane	29.17	27.84

Protein Annotations

EntrezGene:100251973	wikigene:100251973	Gene3D:2.60.40.420	MapMan:35.1	EMBL:AM476362	ProteinID:CAN70727
ProteinID:CAN70727.1	ProteinID:CBI25183	ProteinID:CBI25183.3	InterPro:Cupredoxin	UniProt:D7T3V1	EMBL:FN595513
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0022900
GO:GO:0046658	InterPro:IPR003245	InterPro:IPR008972	EntrezGene:LOC100251973	wikigene:LOC100251973	PFAM:PD003122
PFAM:PF02298	PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF13	InterPro:Phytocyanin_dom	SUPFAM:SSF49503
SignalP:SignalP-noTM	TIGR:TC59560	UniParc:UPI00015CB9DA	ArrayExpress:VIT_09s0018g00520	EnsemblPlantsGene:VIT_09s0018g00520	EnsemblPlants:VIT_09s0018g00520.t01
unigene:Vvi.15342	RefSeq:XP_002263869	RefSeq:XP_002263869.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:16741111..16741954

Molecular Weight (calculated)

18245.7 Da

IEP (calculated)

8.803

GRAVY (calculated)

0.114

Length

168 amino acids

Sequence
(BLAST)

001: MSLILLLLIS AAATISSVTA TDHIVGANRG WNPGINYTLW ANNHTFYVND LISFRYQKNQ YNVFEVNQTG YDNCTTDSAT GNWSSGKDFI LLDKAKRYYF
101: ICGNGGCFSG MKVSVLVHPL PTPPSASTAA AEISKPNSAA ARAPRSGSMA FVGLVLWIGW IWLGSGWI

Best Arabidopsis Sequence Match ( AT5G15350.1 )
(BLAST)

001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW

Arabidopsis Description

ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.