Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G362200.1 | Wheat | extracellular, plasma membrane, vacuole | 80.0 | 83.83 |
| KXG36173 | Sorghum | extracellular | 59.43 | 62.65 |
| Os09t0557900-01 | Rice | extracellular | 59.43 | 61.9 |
| Zm00001d021391_P001 | Maize | extracellular | 57.71 | 60.12 |
| GSMUA_Achr7P05270_001 | Banana | extracellular | 48.57 | 49.42 |
| VIT_09s0018g00520.t01 | Wine grape | extracellular | 46.86 | 48.81 |
| Solyc03g117560.2.1 | Tomato | extracellular | 46.29 | 48.8 |
| KRH47324 | Soybean | extracellular | 45.71 | 47.06 |
| PGSC0003DMT400073746 | Potato | extracellular | 43.43 | 44.44 |
| Solyc12g042580.1.1 | Tomato | extracellular | 41.71 | 44.24 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 29.14 | 29.65 |
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 32.0 | 29.63 |
| TraesCS5D01G404900.1 | Wheat | plastid | 28.57 | 20.66 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G369100.1 | EnsemblPlantsGene:TraesCS5D01G369100 | Gene3D:2.60.40.420 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0009055 |
| InterPro:Cupredoxin | InterPro:IPR003245 | InterPro:IPR008972 | InterPro:Phytocyanin_dom | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF13 |
| PFAM:PD003122 | PFAM:PF02298 | PFscan:PS51485 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF49503 |
| TIGR:cd11017 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:444727654..444728325
Molecular Weight (calculated)
17951.1 Da
IEP (calculated)
6.216
GRAVY (calculated)
0.249
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRALLLAV AGVVVAGCAV GLSGATDHIV GANRGWNPNI NYSSWSANQT FYVGDLISFR YQKGTHNVFA VNETGYDNCT MDGVTGNWTS GKDFIPLPHP
101: GTYFFICGNG FCQAGMKVAI TVRIFDLGPE IYPPPAPGAD NPPSSSSSSS SFAAGAWPAA AAAATALGAA AIIAL
101: GTYFFICGNG FCQAGMKVAI TVRIFDLGPE IYPPPAPGAD NPPSSSSSSS SFAAGAWPAA AAAATALGAA AIIAL
001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW
Arabidopsis Description
ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.