Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_09s0018g00520.t01 | Wine grape | extracellular | 55.23 | 56.55 |
| KRH47324 | Soybean | extracellular | 52.91 | 53.53 |
| Os09t0557900-01 | Rice | extracellular | 51.16 | 52.38 |
| KXG36173 | Sorghum | extracellular | 48.84 | 50.6 |
| Solyc03g117560.2.1 | Tomato | extracellular | 48.26 | 50.0 |
| Zm00001d021391_P001 | Maize | extracellular | 48.84 | 50.0 |
| TraesCS5B01G362200.1 | Wheat | extracellular, plasma membrane, vacuole | 47.67 | 49.1 |
| TraesCS5D01G369100.1 | Wheat | plasma membrane | 49.42 | 48.57 |
| PGSC0003DMT400073746 | Potato | extracellular | 45.35 | 45.61 |
| Solyc12g042580.1.1 | Tomato | extracellular | 43.6 | 45.45 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 31.4 | 31.76 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 26.16 | 26.79 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 26.74 | 26.44 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 25.0 | 19.46 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | EnsemblPlantsGene:GSMUA_Achr7G05270_001 |
| EnsemblPlants:GSMUA_Achr7P05270_001 | EnsemblPlants:GSMUA_Achr7T05270_001 | InterPro:IPR003245 | InterPro:IPR008972 | UniProt:M0TEW7 | PFAM:PD003122 |
| PFAM:PF02298 | PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF13 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 |
| SignalP:SignalP-noTM | UniParc:UPI0002950935 | SEG:seg | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G05270_001]
Coordinates
chr7:+:3933176..3933754
Molecular Weight (calculated)
18382.1 Da
IEP (calculated)
8.465
GRAVY (calculated)
0.262
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFRQLRLLL LLLSVAVAFV SATDHIVGGH LGWNPNINYT LWANNQTFYV NDLISFRYQK NMYNVFEVNK TGYDNCTMDG LAGNWSSGKD FIPLDQAKTY
101: YFICGNGFCF SGMKVSVTVV HLLNASSAAP PNASTHGAAG SAAPGLRPWP SNPAALLVAA VASMVIGSGV GI
101: YFICGNGFCF SGMKVSVTVV HLLNASSAAP PNASTHGAAG SAAPGLRPWP SNPAALLVAA VASMVIGSGV GI
001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW
Arabidopsis Description
ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.