Factsheet for VIT_14s0108g01310.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

nucleus 1
mitochondrion 2
extracellular 3
plasma membrane 4
endoplasmic reticulum 2
vacuole 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG93595	Soybean	extracellular	39.77	39.77
VIT_14s0108g01320.t01	Wine grape	extracellular	35.8	39.62
KRH18434	Soybean	extracellular, plasma membrane	38.07	38.29
TraesCS3B01G334700.1	Wheat	extracellular	21.02	33.64
GSMUA_Achr4P23310_001	Banana	extracellular	32.39	33.53
TraesCS5B01G400400.1	Wheat	extracellular, plasma membrane	30.11	32.12
TraesCS5A01G395600.1	Wheat	extracellular, plasma membrane	30.11	32.12
HORVU5Hr1G096540.1	Barley	plasma membrane	30.11	31.74
EER90853	Sorghum	extracellular	30.11	31.55
HORVU3Hr1G074100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	31.82	31.46
TraesCS3D01G300100.1	Wheat	extracellular	30.68	31.4
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	29.55	30.95
GSMUA_Achr4P23300_001	Banana	extracellular	30.11	30.46
VIT_09s0018g00520.t01	Wine grape	extracellular	27.84	29.17
TraesCS3A01G301900.1	Wheat	extracellular	27.84	28.32
Os03t0758500-01	Rice	plasma membrane	25.57	27.27
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	28.98	26.98
Os07t0112700-01	Rice	extracellular	27.27	26.97
Zm00001d043357_P001	Maize	extracellular	28.98	26.42
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	28.98	26.29
TraesCS2B01G279700.1	Wheat	unclear	28.41	25.51
KXG33437	Sorghum	plastid	30.11	25.36
Zm00001d018641_P001	Maize	extracellular	27.27	24.62
GSMUA_Achr2P13520_001	Banana	vacuole	30.68	24.43
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	26.7	23.86
TraesCS5D01G404900.1	Wheat	plastid	30.11	21.9
EER95743	Sorghum	extracellular	25.57	21.74

Protein Annotations

EntrezGene:100252670	wikigene:100252670	Gene3D:2.60.40.420	MapMan:35.1	ProteinID:CBI22266	ProteinID:CBI22266.3
InterPro:Cupredoxin	UniProt:D7SXG9	EMBL:FN595239	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022900	GO:GO:0046658	InterPro:IPR003245
InterPro:IPR008972	EntrezGene:LOC100252670	wikigene:LOC100252670	PFAM:PD003122	PFAM:PF02298	PFscan:PS51257
PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF63	InterPro:Phytocyanin_dom	SUPFAM:SSF49503	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI00015C928E	ArrayExpress:VIT_14s0108g01310	EnsemblPlantsGene:VIT_14s0108g01310	EnsemblPlants:VIT_14s0108g01310.t01	unigene:Vvi.20606
RefSeq:XP_002278873	RefSeq:XP_002278873.2	RefSeq:XP_002278873.3	SEG:seg	:	:

Description

No Description!

Coordinates

chr14:-:29931318..29932643

Molecular Weight (calculated)

20116.2 Da

IEP (calculated)

9.178

GRAVY (calculated)

-0.132

Length

176 amino acids

Sequence
(BLAST)

001: MSRFKCSRNP GGMLRMWWWW WLMAAAAAMV GGCEANLIKV GGKQGWGPNV NYTEWAKNKH FYVGDWLYFI FDKHYFTVFE VNETNYERCS EQEFITNITK
101: GGRDVFNLTH PRPYYFLSSG GYCWHGMKLA INVTHMPAPA PSPSKSNAPP SASSPTPIIL SIALLCPLLF KFFFHA

Best Arabidopsis Sequence Match ( AT2G27035.1 )
(BLAST)

001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL

Arabidopsis Description

ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.