Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G018030.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G12880.1 | HORVU3Hr1G018030.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G334700.1 | Wheat | extracellular | 49.44 | 80.0 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 75.84 | 78.49 |
| TraesCS3A01G301900.1 | Wheat | extracellular | 61.24 | 63.01 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 44.38 | 46.47 |
| Zm00001d043357_P001 | Maize | extracellular | 46.63 | 43.01 |
| KXG33437 | Sorghum | plastid | 47.75 | 40.67 |
| AT4G12880.1 | Thale cress | extracellular | 32.02 | 40.43 |
| Bra035997.1-P | Field mustard | extracellular | 29.78 | 38.13 |
| CDY14895 | Canola | extracellular | 29.78 | 38.13 |
| CDX96917 | Canola | extracellular | 29.78 | 38.13 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 33.15 | 35.33 |
| CDY26419 | Canola | extracellular | 30.9 | 33.95 |
| AT3G01070.1 | Thale cress | extracellular | 31.46 | 33.53 |
| CDY34699 | Canola | extracellular | 33.15 | 33.52 |
| Bra021481.1-P | Field mustard | extracellular | 33.15 | 33.52 |
| CDY55798 | Canola | extracellular | 33.15 | 33.52 |
| PGSC0003DMT400003639 | Potato | extracellular | 29.21 | 32.7 |
| KRH18432 | Soybean | extracellular | 30.9 | 32.54 |
| CDX78627 | Canola | extracellular | 30.9 | 32.35 |
| Bra006297.1-P | Field mustard | extracellular | 30.9 | 32.35 |
| CDY37547 | Canola | extracellular | 32.02 | 32.2 |
| VIT_14s0108g01310.t01 | Wine grape | extracellular, plasma membrane | 31.46 | 31.82 |
| CDX70608 | Canola | extracellular | 30.34 | 31.76 |
| Solyc02g088380.2.1 | Tomato | extracellular | 29.78 | 31.74 |
| Bra039148.1-P | Field mustard | extracellular | 31.46 | 31.64 |
| Bra000527.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 29.21 | 31.14 |
| CDX83251 | Canola | extracellular | 29.21 | 31.14 |
| CDY38541 | Canola | extracellular | 29.21 | 31.14 |
| CDY43265 | Canola | plasma membrane | 30.9 | 31.07 |
| VIT_14s0108g01320.t01 | Wine grape | extracellular | 27.53 | 30.82 |
| AT5G15350.1 | Thale cress | extracellular | 29.78 | 30.81 |
| AT2G27035.1 | Thale cress | extracellular | 25.84 | 28.22 |
| KRH73474 | Soybean | extracellular | 28.09 | 27.93 |
| KRG89877 | Soybean | extracellular | 25.28 | 27.61 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 29.78 | 26.9 |
| PGSC0003DMT400003642 | Potato | extracellular, golgi | 26.4 | 26.7 |
| KRH18434 | Soybean | extracellular, plasma membrane | 24.16 | 24.57 |
| KRH73475 | Soybean | extracellular | 26.4 | 23.86 |
| KRG93595 | Soybean | extracellular | 21.91 | 22.16 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | UniProt:A0A287LNJ4 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 |
| EnsemblPlantsGene:HORVU3Hr1G074100 | EnsemblPlants:HORVU3Hr1G074100.1 | InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PF02298 |
| PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF43 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000B467A1F | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:557074771..557076003
Molecular Weight (calculated)
19233.1 Da
IEP (calculated)
7.946
GRAVY (calculated)
0.158
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTLTPDLP LLLLLLGTLL LLAAAPAPSA AEKFVVGDKK NWAPNVNYTT WPDQYRFHVG DWLQFNYARG GMYDVVQVAN EAAYEKCDPT NPVVSYDRGR
101: GYVFQLNHTG RYYFICSRGY CWGGMKVTVL VEDRPARPPY AAAPAPNAAA HHAGVASWAL AAAAASLCAA VLGLPFAV
101: GYVFQLNHTG RYYFICSRGY CWGGMKVTVL VEDRPARPPY AAAPAPNAAA HHAGVASWAL AAAAASLCAA VLGLPFAV
001: MGRSMVLISA VVLAFLVAAP IPEVTAKKYL VGDKKFWNPN INYTLWAQGK HFYVGDWLYF VFYRDQHNIL EVNKADYEKC ISNRPIRNYT RGAGRDIVPL
101: YETRRYYLLD GRGGCVQGMK LDVLVETPPP PPPFTPPPPA Q
101: YETRRYYLLD GRGGCVQGMK LDVLVETPPP PPPFTPPPPA Q
Arabidopsis Description
ENODL19At4g12880 [Source:UniProtKB/TrEMBL;Acc:Q9STZ8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.