CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78627	Canola	extracellular	97.65	97.65
CDY26419	Canola	extracellular	80.0	83.95
AT5G15350.1	Thale cress	extracellular	83.53	82.56
CDX96917	Canola	extracellular	62.94	76.98
CDY14895	Canola	extracellular	62.94	76.98
CDY55798	Canola	extracellular	61.76	59.66
CDY34699	Canola	extracellular	61.18	59.09
KRH18432	Soybean	extracellular	56.47	56.8
CDY43265	Canola	plasma membrane	55.29	53.11
VIT_14s0108g01320.t01	Wine grape	extracellular	49.41	52.83
CDY37547	Canola	extracellular	54.71	52.54
PGSC0003DMT400003642	Potato	extracellular, golgi	51.76	50.0
TraesCS3B01G334700.1	Wheat	extracellular	22.35	34.55
CDY38541	Canola	extracellular	33.53	34.13
CDX83251	Canola	extracellular	33.53	34.13
TraesCS5B01G400400.1	Wheat	extracellular, plasma membrane	31.76	32.73
TraesCS5A01G395600.1	Wheat	extracellular, plasma membrane	31.18	32.12
GSMUA_Achr4P23310_001	Banana	extracellular	31.76	31.76
HORVU5Hr1G096540.1	Barley	plasma membrane	30.59	31.14
HORVU3Hr1G074100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	31.76	30.34
Os03t0758500-01	Rice	plasma membrane	28.82	29.7
TraesCS3D01G300100.1	Wheat	extracellular	30.0	29.65
EER90853	Sorghum	extracellular	28.24	28.57
TraesCS3A01G301900.1	Wheat	extracellular	28.82	28.32
GSMUA_Achr4P23300_001	Banana	extracellular	28.24	27.59
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	25.29	25.6
Zm00001d018641_P001	Maize	extracellular	27.65	24.1
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	27.06	23.71
Os07t0112700-01	Rice	extracellular	24.71	23.6
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	25.88	23.28
TraesCS2B01G279700.1	Wheat	unclear	26.47	22.96
Zm00001d043357_P001	Maize	extracellular	25.88	22.8
TraesCS5D01G404900.1	Wheat	plastid	31.76	22.31
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	25.29	21.83
GSMUA_Achr2P13520_001	Banana	vacuole	27.65	21.27
EER95743	Sorghum	extracellular	25.88	21.26
KXG33437	Sorghum	plastid	25.29	20.57

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.1	GO:A0A078C6K3	EnsemblPlants:CDX70608	ProteinID:CDX70608	ProteinID:CDX70608.1
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0009055	EnsemblPlantsGene:GSBRNA2T00140452001	InterPro:IPR003245
InterPro:IPR008972	PFAM:PD003122	PFAM:PF02298	PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF63
InterPro:Phytocyanin_dom	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0003E67995	SEG:seg

Description

BnaC03g06920D

Coordinates

chrLK031791:-:1211926..1213228

Molecular Weight (calculated)

19086.3 Da

IEP (calculated)

9.704

GRAVY (calculated)

0.088

Length

170 amino acids

Sequence
(BLAST)

001: MARFTVLIAA VILAFVVAVP EVTAKKYTVG ENKFWNPNIN YTIWAQGKHF YLGDWLYFVF DRNQHNILEV NKTDYENCNA DHPLVNWTRG AGRDIVTLNV
101: TKHYYLLDGK GGCYGGMKLA VKVEKLPPPP KAAPVKSTGL VSMATGVAQF VIPFALFSVS TMRDAILRMW

Best Arabidopsis Sequence Match ( AT5G15350.1 )
(BLAST)

001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW

Arabidopsis Description

ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.