CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38541	Canola	extracellular	98.8	98.8
Bra000527.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	90.42	90.42
AT2G27035.1	Thale cress	extracellular	62.87	64.42
KRG89877	Soybean	extracellular	44.91	46.01
PGSC0003DMT400003639	Potato	extracellular	43.11	45.28
Solyc02g088380.2.1	Tomato	extracellular	41.32	41.32
CDX96917	Canola	extracellular	34.13	41.01
CDY14895	Canola	extracellular	34.13	41.01
CDY26419	Canola	extracellular	34.73	35.8
CDX70608	Canola	extracellular	34.13	33.53
CDX78627	Canola	extracellular	34.13	33.53
CDY43265	Canola	plasma membrane	33.53	31.64
CDY37547	Canola	extracellular	32.93	31.07
TraesCS3B01G334700.1	Wheat	extracellular	19.76	30.0
Os03t0758500-01	Rice	plasma membrane	29.34	29.7
CDY34699	Canola	extracellular	31.14	29.55
CDY55798	Canola	extracellular	31.14	29.55
HORVU3Hr1G074100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	31.14	29.21
GSMUA_Achr4P23300_001	Banana	extracellular	29.94	28.74
GSMUA_Achr4P23310_001	Banana	extracellular	28.74	28.24
EER90853	Sorghum	extracellular	28.14	27.98
TraesCS3D01G300100.1	Wheat	extracellular	28.74	27.91
TraesCS5B01G400400.1	Wheat	extracellular, plasma membrane	27.54	27.88
TraesCS5A01G395600.1	Wheat	extracellular, plasma membrane	27.54	27.88
HORVU5Hr1G096540.1	Barley	plasma membrane	27.54	27.54
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	26.95	26.79
Zm00001d043357_P001	Maize	extracellular	30.54	26.42
TraesCS3A01G301900.1	Wheat	extracellular	26.95	26.01
Zm00001d018641_P001	Maize	extracellular	28.74	24.62
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	26.95	23.81
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	27.54	23.71
Os07t0112700-01	Rice	extracellular	24.55	23.03
KXG33437	Sorghum	plastid	28.14	22.49
TraesCS2B01G279700.1	Wheat	unclear	26.35	22.45
GSMUA_Achr2P13520_001	Banana	vacuole	27.54	20.81
EER95743	Sorghum	extracellular	25.75	20.77
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	23.35	19.8
TraesCS5D01G404900.1	Wheat	plastid	27.54	19.01

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.1	GO:A0A078D1L6	EnsemblPlants:CDX83251	ProteinID:CDX83251	ProteinID:CDX83251.1
InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022900
EnsemblPlantsGene:GSBRNA2T00138801001	InterPro:IPR003245	InterPro:IPR008972	PFAM:PD003122	PFAM:PF02298	PFscan:PS51485
PANTHER:PTHR33021	PANTHER:PTHR33021:SF4	InterPro:Phytocyanin_dom	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0004EF1C04	SEG:seg	:	:	:	:

Description

BnaA03g22550D

Coordinates

chrLK031832:-:655525..656629

Molecular Weight (calculated)

19124.2 Da

IEP (calculated)

8.449

GRAVY (calculated)

0.034

Length

167 amino acids

Sequence
(BLAST)

001: MGIRTIWALL MMMMIIEVES SLHRVGGGKY NWKPDVNFSD WANHQRFYSG DWLYFGFDRT RHNILQVNKS SYEQCIDNDF IFNVTRGGRD VFQLLQPKPY
101: YFICGRGYCL KGMKLSVNVL PQPPPSTSTV PIIPASTANT LIIDSDAFTA IATTILTVFI FKALYFD

Best Arabidopsis Sequence Match ( AT2G27035.1 )
(BLAST)

001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL

Arabidopsis Description

ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.