Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G018030.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G12880.1 | HORVU3Hr1G018030.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 74.62 | 77.78 |
| TraesCS2B01G279700.1 | Wheat | unclear | 75.63 | 76.02 |
| TraesCS2A01G262400.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 73.6 | 74.74 |
| Os07t0112700-01 | Rice | extracellular | 62.44 | 69.1 |
| Zm00001d018641_P001 | Maize | extracellular | 52.79 | 53.33 |
| EER95743 | Sorghum | extracellular | 52.28 | 49.76 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 35.53 | 41.67 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 34.52 | 39.08 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 30.46 | 35.93 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 36.04 | 32.13 |
| CDX96917 | Canola | extracellular | 21.83 | 30.94 |
| CDY14895 | Canola | extracellular | 21.83 | 30.94 |
| Bra035997.1-P | Field mustard | extracellular | 21.83 | 30.94 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 26.9 | 29.78 |
| PGSC0003DMT400003639 | Potato | extracellular | 23.35 | 28.93 |
| AT4G12880.1 | Thale cress | extracellular | 20.3 | 28.37 |
| VIT_14s0108g01320.t01 | Wine grape | extracellular | 22.84 | 28.3 |
| AT2G27035.1 | Thale cress | extracellular | 22.84 | 27.61 |
| Solyc02g088380.2.1 | Tomato | extracellular | 22.84 | 26.95 |
| VIT_14s0108g01310.t01 | Wine grape | extracellular, plasma membrane | 23.86 | 26.7 |
| KRH18432 | Soybean | extracellular | 22.84 | 26.63 |
| CDY26419 | Canola | extracellular | 21.83 | 26.54 |
| AT3G01070.1 | Thale cress | extracellular | 22.34 | 26.35 |
| Bra006297.1-P | Field mustard | extracellular | 22.34 | 25.88 |
| CDX78627 | Canola | extracellular | 22.34 | 25.88 |
| CDX70608 | Canola | extracellular | 21.83 | 25.29 |
| CDY34699 | Canola | extracellular | 22.34 | 25.0 |
| AT5G15350.1 | Thale cress | extracellular | 21.83 | 25.0 |
| CDY55798 | Canola | extracellular | 22.34 | 25.0 |
| Bra039148.1-P | Field mustard | extracellular | 22.34 | 24.86 |
| CDY43265 | Canola | plasma membrane | 22.34 | 24.86 |
| Bra021481.1-P | Field mustard | extracellular | 21.83 | 24.43 |
| PGSC0003DMT400003642 | Potato | extracellular, golgi | 21.83 | 24.43 |
| CDY37547 | Canola | extracellular | 21.83 | 24.29 |
| Bra000527.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 20.3 | 23.95 |
| KRG89877 | Soybean | extracellular | 19.8 | 23.93 |
| KRH73474 | Soybean | extracellular | 21.32 | 23.46 |
| CDY38541 | Canola | extracellular | 19.8 | 23.35 |
| CDX83251 | Canola | extracellular | 19.8 | 23.35 |
| KRH18434 | Soybean | extracellular, plasma membrane | 19.29 | 21.71 |
| KRG93595 | Soybean | extracellular | 19.29 | 21.59 |
| KRH73475 | Soybean | extracellular | 20.81 | 20.81 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.2 | UniProt:A0A287I6W6 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 |
| EnsemblPlantsGene:HORVU2Hr1G063510 | EnsemblPlants:HORVU2Hr1G063510.2 | InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PF02298 |
| PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF47 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI000B46320F | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:429178669..429180159
Molecular Weight (calculated)
19286.7 Da
IEP (calculated)
9.277
GRAVY (calculated)
-0.327
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNPDREMC RRPGRGAKML MPVMAGLAVV VLASLPSAAV ATNYTVGDEK GGNPKVDYTS WVKKHRPFYK GDWLLFEYQN GRSDVVQVDE VGYDNCDKES
101: AISSHSKGTS YAFQLKEAKD YFFICSYGYC YSGMKLAVTA KKGPASSSPD SSSSSSSSSS SPAAKSSSKS AAAPIAXXXX XXXXXXXXXX XXXLRML
101: AISSHSKGTS YAFQLKEAKD YFFICSYGYC YSGMKLAVTA KKGPASSSPD SSSSSSSSSS SPAAKSSSKS AAAPIAXXXX XXXXXXXXXX XXXLRML
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.