Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
29876421
|
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003639 | Potato | extracellular | 77.84 | 81.76 |
| KRG89877 | Soybean | extracellular | 41.92 | 42.94 |
| AT2G27035.1 | Thale cress | extracellular | 40.72 | 41.72 |
| CDX83251 | Canola | extracellular | 41.32 | 41.32 |
| CDY38541 | Canola | extracellular | 41.32 | 41.32 |
| Bra000527.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 40.72 | 40.72 |
| KRH73474 | Soybean | extracellular | 40.12 | 37.43 |
| TraesCS3B01G334700.1 | Wheat | extracellular | 23.35 | 35.45 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 34.13 | 33.14 |
| KRH73475 | Soybean | extracellular | 38.92 | 32.99 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 31.74 | 31.18 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 32.34 | 31.03 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 30.54 | 30.36 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 31.74 | 29.78 |
| Solyc03g117560.2.1 | Tomato | extracellular | 29.34 | 29.52 |
| EER90853 | Sorghum | extracellular | 28.74 | 28.57 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 28.14 | 28.48 |
| TraesCS5A01G395600.1 | Wheat | extracellular, plasma membrane | 28.14 | 28.48 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 28.14 | 28.14 |
| Zm00001d043357_P001 | Maize | extracellular | 32.34 | 27.98 |
| Os03t0758500-01 | Rice | plasma membrane | 27.54 | 27.88 |
| KXG33437 | Sorghum | plastid | 34.13 | 27.27 |
| TraesCS3A01G301900.1 | Wheat | extracellular | 28.14 | 27.17 |
| Os07t0112700-01 | Rice | extracellular | 26.95 | 25.28 |
| Solyc12g042580.1.1 | Tomato | extracellular | 24.55 | 24.85 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 31.14 | 23.53 |
| TraesCS2B01G279700.1 | Wheat | unclear | 27.54 | 23.47 |
| Zm00001d018641_P001 | Maize | extracellular | 26.95 | 23.08 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 26.95 | 22.84 |
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 25.75 | 22.75 |
| TraesCS2A01G262400.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 25.15 | 21.65 |
| TraesCS5D01G404900.1 | Wheat | plastid | 28.74 | 19.83 |
| EER95743 | Sorghum | extracellular | 24.55 | 19.81 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0022900 | GO:GO:0046658 | InterPro:IPR003245 | InterPro:IPR008972 |
| UniProt:K4BBZ4 | PFAM:PD003122 | PFAM:PF02298 | PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF17 |
| InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc02g088380.2 | EnsemblPlants:Solyc02g088380.2.1 | UniParc:UPI00027686C4 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:50481961..50483104
Molecular Weight (calculated)
18967.6 Da
IEP (calculated)
7.192
GRAVY (calculated)
-0.117
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MRFDLMMIRS MMLLGLMKCA ASGLDKVGGK HGWDQNVNYT DWASHQHFYV GDWLYFVFDK HYYSVLEVNQ TNYEQCIDSD FISNITRGGR DVFHLTQARP
101: YYFISSGGYC FHGMKLAINV EQPLPASPAP SSSNKTNASP PQIDKHLIIS AFASSTLVWM FLFAQAT
101: YYFISSGGYC FHGMKLAINV EQPLPASPAP SSSNKTNASP PQIDKHLIIS AFASSTLVWM FLFAQAT
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.