Factsheet for Os03t0758500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

plasma membrane: 18260611
plasma membrane: 19502382

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12880.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G400400.1	Wheat	extracellular, plasma membrane	66.67	66.67
TraesCS5A01G395600.1	Wheat	extracellular, plasma membrane	66.06	66.06
EER90853	Sorghum	extracellular	66.06	64.88
HORVU5Hr1G096540.1	Barley	plasma membrane	64.85	64.07
GSMUA_Achr4P23300_001	Banana	extracellular	49.7	47.13
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	46.67	45.83
TraesCS5D01G404900.1	Wheat	plastid	66.06	45.04
Os07t0112700-01	Rice	extracellular	41.21	38.2
CDX96917	Canola	extracellular	29.7	35.25
CDY14895	Canola	extracellular	29.7	35.25
Bra035997.1-P	Field mustard	extracellular	29.09	34.53
GSMUA_Achr2P13520_001	Banana	vacuole	45.45	33.94
KRH18432	Soybean	extracellular	34.55	33.73
AT4G12880.1	Thale cress	extracellular	27.88	32.62
CDY43265	Canola	plasma membrane	33.94	31.64
AT3G01070.1	Thale cress	extracellular	31.52	31.14
CDY34699	Canola	extracellular	32.73	30.68
CDY55798	Canola	extracellular	32.73	30.68
Bra021481.1-P	Field mustard	extracellular	32.73	30.68
CDY26419	Canola	extracellular	29.7	30.25
AT5G15350.1	Thale cress	extracellular	30.91	29.65
VIT_14s0108g01320.t01	Wine grape	extracellular	28.48	29.56
CDY37547	Canola	extracellular	31.52	29.38
CDY38541	Canola	extracellular	29.7	29.34
CDX83251	Canola	extracellular	29.7	29.34
CDX70608	Canola	extracellular	29.7	28.82
CDX78627	Canola	extracellular	29.7	28.82
Bra006297.1-P	Field mustard	extracellular	29.7	28.82
Bra039148.1-P	Field mustard	extracellular	30.91	28.81
AT2G27035.1	Thale cress	extracellular	27.88	28.22
Os09t0557900-01	Rice	extracellular	28.48	27.98
PGSC0003DMT400003639	Potato	extracellular	26.67	27.67
Solyc02g088380.2.1	Tomato	extracellular	27.88	27.54
KRG89877	Soybean	extracellular	26.67	26.99
PGSC0003DMT400003642	Potato	extracellular, golgi	28.48	26.7
Bra000527.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	26.67	26.35
VIT_14s0108g01310.t01	Wine grape	extracellular, plasma membrane	27.27	25.57
KRG93595	Soybean	extracellular	24.24	22.73
KRH73474	Soybean	extracellular	23.03	21.23
KRH18434	Soybean	extracellular, plasma membrane	20.61	19.43
KRH73475	Soybean	extracellular	22.42	18.78

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.1	EntrezGene:4334174	ProteinID:AAK16182.1	ProteinID:ABF98980.1	EMBL:AK102002
ProteinID:BAF13247.1	ProteinID:BAS86482.1	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0022900	GO:GO:0046658	InterPro:IPR003245
InterPro:IPR008972	EnsemblPlantsGene:Os03g0758500	EnsemblPlants:Os03t0758500-01	PFAM:PD003122	PFAM:PF02298	PFscan:PS51257
PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF56	InterPro:Phytocyanin_dom	UniProt:Q9AUW1	SUPFAM:SSF49503
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000A4C3A	RefSeq:XP_015629033.1	SEG:seg	:

Description

EARLY NODULIN LIKE PROTEIN 12Cupredoxin domain containing protein. (Os03t0758500-01);Similar to blue copper protein. (Os03t0758500-02)

Coordinates

chr3:-:31359578..31360468

Molecular Weight (calculated)

18071.6 Da

IEP (calculated)

9.287

GRAVY (calculated)

-0.004

Length

165 amino acids

Sequence
(BLAST)

001: MVMTRRRAAL LVVAMCACAA LPSTTTANKF SINWKPNTNY SDWPAQHGPF YKGDWLVFYY TAGQADVIQV DAAGYNTCDA TNAISNYSKG RTYAFELNET
101: KTYYFICSYG YCFGGMRLQI KTEKLPPPSP PAAAKDKSAA AFTASRASLF YAAAAAVLAA ILRMF

Best Arabidopsis Sequence Match ( AT5G15350.1 )
(BLAST)

001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW

Arabidopsis Description

ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.