Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G12880.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G12880.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY14895 | Canola | extracellular | 100.0 | 100.0 |
| Bra035997.1-P | Field mustard | extracellular | 98.56 | 98.56 |
| AT4G12880.1 | Thale cress | extracellular | 76.98 | 75.89 |
| CDY26419 | Canola | extracellular | 81.3 | 69.75 |
| CDX70608 | Canola | extracellular | 76.98 | 62.94 |
| CDX78627 | Canola | extracellular | 76.98 | 62.94 |
| KRH18432 | Soybean | extracellular | 61.87 | 50.89 |
| CDY34699 | Canola | extracellular | 63.31 | 50.0 |
| CDY55798 | Canola | extracellular | 63.31 | 50.0 |
| CDY43265 | Canola | plasma membrane | 58.27 | 45.76 |
| CDY37547 | Canola | extracellular | 58.27 | 45.76 |
| VIT_14s0108g01320.t01 | Wine grape | extracellular | 46.76 | 40.88 |
| PGSC0003DMT400003642 | Potato | extracellular, golgi | 50.36 | 39.77 |
| TraesCS3B01G334700.1 | Wheat | extracellular | 30.94 | 39.09 |
| CDY38541 | Canola | extracellular | 41.01 | 34.13 |
| CDX83251 | Canola | extracellular | 41.01 | 34.13 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 38.13 | 32.12 |
| TraesCS5A01G395600.1 | Wheat | extracellular, plasma membrane | 37.41 | 31.52 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 37.41 | 31.14 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 37.41 | 30.23 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 38.13 | 29.78 |
| Os03t0758500-01 | Rice | plasma membrane | 35.25 | 29.7 |
| TraesCS3A01G301900.1 | Wheat | extracellular | 35.97 | 28.9 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 35.97 | 28.74 |
| EER90853 | Sorghum | extracellular | 34.53 | 28.57 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 34.53 | 28.24 |
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 34.53 | 25.4 |
| Zm00001d043357_P001 | Maize | extracellular | 34.53 | 24.87 |
| TraesCS2A01G262400.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 34.53 | 24.74 |
| Os07t0112700-01 | Rice | extracellular | 31.65 | 24.72 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 29.5 | 24.4 |
| TraesCS2B01G279700.1 | Wheat | unclear | 33.81 | 23.98 |
| Zm00001d018641_P001 | Maize | extracellular | 32.37 | 23.08 |
| TraesCS5D01G404900.1 | Wheat | plastid | 38.13 | 21.9 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 30.94 | 21.83 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 33.09 | 20.81 |
| EER95743 | Sorghum | extracellular | 30.94 | 20.77 |
| KXG33437 | Sorghum | plastid | 30.94 | 20.57 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | GO:A0A078FKC5 | UniProt:A0A078FKC5 | EnsemblPlants:CDX96917 | ProteinID:CDX96917 |
| ProteinID:CDX96917.1 | ProteinID:CDY14895.1 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | EnsemblPlantsGene:GSBRNA2T00103815001 |
| InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PF02298 | PFscan:PS51485 | PANTHER:PTHR33021 |
| PANTHER:PTHR33021:SF63 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EB0F0A |
| SEG:seg | : | : | : | : | : |
Description
BnaC02g30550DBnaA02g22370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKC5]
Coordinates
chrLK031896:+:414365..415453
Molecular Weight (calculated)
15965.4 Da
IEP (calculated)
9.619
GRAVY (calculated)
-0.256
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFTVLIAA AVLAFLVAAP VPEVTAKKYL VGDKKFWNPD INYDTWVQGK HFYLGDWLYF VYYRDQHNIL EVNKTDYERC ISDHPIRNYT RGAGRDIVPL
101: NVTKQYYLLD GRGGCFKGMK LTVTVEKLPP PPKSAPVKH
101: NVTKQYYLLD GRGGCFKGMK LTVTVEKLPP PPKSAPVKH
001: MGRSMVLISA VVLAFLVAAP IPEVTAKKYL VGDKKFWNPN INYTLWAQGK HFYVGDWLYF VFYRDQHNIL EVNKADYEKC ISNRPIRNYT RGAGRDIVPL
101: YETRRYYLLD GRGGCVQGMK LDVLVETPPP PPPFTPPPPA Q
101: YETRRYYLLD GRGGCVQGMK LDVLVETPPP PPPFTPPPPA Q
Arabidopsis Description
ENODL19At4g12880 [Source:UniProtKB/TrEMBL;Acc:Q9STZ8]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.