CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH42483
KRH58580

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12880.1	KRH42483	AT2G01950.1	19000166
AT4G12880.1	KRH58580	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035997.1-P	Field mustard	extracellular	50.89	61.87
CDY14895	Canola	extracellular	50.89	61.87
CDX96917	Canola	extracellular	50.89	61.87
CDY26419	Canola	extracellular	57.99	60.49
VIT_14s0108g01320.t01	Wine grape	extracellular	56.8	60.38
Bra006297.1-P	Field mustard	extracellular	57.4	57.06
CDX78627	Canola	extracellular	57.4	57.06
CDX70608	Canola	extracellular	56.8	56.47
AT5G15350.1	Thale cress	extracellular	54.44	53.49
AT4G12880.1	Thale cress	extracellular	44.38	53.19
PGSC0003DMT400003642	Potato	extracellular, golgi	55.03	52.84
Bra021481.1-P	Field mustard	extracellular	52.66	50.57
CDY34699	Canola	extracellular	52.66	50.57
CDY55798	Canola	extracellular	52.66	50.57
AT3G01070.1	Thale cress	extracellular	49.7	50.3
CDY43265	Canola	plasma membrane	50.89	48.59
Bra039148.1-P	Field mustard	extracellular	48.52	46.33
CDY37547	Canola	extracellular	48.52	46.33
TraesCS3B01G334700.1	Wheat	extracellular	26.04	40.0
KRG89877	Soybean	extracellular	35.5	36.81
KRH47324	Soybean	extracellular	36.69	36.47
GSMUA_Achr4P23310_001	Banana	extracellular	35.5	35.29
Os03t0758500-01	Rice	plasma membrane	33.73	34.55
TraesCS3D01G300100.1	Wheat	extracellular	34.32	33.72
KRH73474	Soybean	extracellular	34.91	32.96
EER90853	Sorghum	extracellular	32.54	32.74
TraesCS5B01G400400.1	Wheat	extracellular, plasma membrane	31.95	32.73
KRH18434	Soybean	extracellular, plasma membrane	33.73	32.57
TraesCS5A01G395600.1	Wheat	extracellular, plasma membrane	31.36	32.12
TraesCS3A01G301900.1	Wheat	extracellular	32.54	31.79
GSMUA_Achr4P23300_001	Banana	extracellular	32.54	31.61
HORVU3Hr1G074100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	32.54	30.9
KRG93595	Soybean	extracellular	31.95	30.68
HORVU5Hr1G096540.1	Barley	plasma membrane	30.18	30.54
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	28.4	28.57
Zm00001d043357_P001	Maize	extracellular	32.54	28.5
KRH73475	Soybean	extracellular	33.14	28.43
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	28.4	25.4
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	28.99	25.26
KXG33437	Sorghum	plastid	30.77	24.88
TraesCS2B01G279700.1	Wheat	unclear	28.4	24.49
GSMUA_Achr2P13520_001	Banana	vacuole	31.95	24.43
Zm00001d018641_P001	Maize	extracellular	27.81	24.1
Os07t0112700-01	Rice	extracellular	24.85	23.6
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	26.63	22.84
EER95743	Sorghum	extracellular	27.81	22.71
TraesCS5D01G404900.1	Wheat	plastid	31.95	22.31

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.1	EMBL:ACUP02008072	InterPro:Cupredoxin	EnsemblPlantsGene:GLYMA_13G059500	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0022900	GO:GO:0046658
UniProt:I1LWP0	InterPro:IPR003245	InterPro:IPR008972	EnsemblPlants:KRH18432	ProteinID:KRH18432	ProteinID:KRH18432.1
PFAM:PD003122	PFAM:PF02298	PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF63	InterPro:Phytocyanin_dom
SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00023D0B62	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:+:15692516..15694852

Molecular Weight (calculated)

19262.4 Da

IEP (calculated)

9.350

GRAVY (calculated)

0.023

Length

169 amino acids

Sequence
(BLAST)

001: MERMKRVLLL LLAFTVLLML PEASATKFTV GNNQFWNPNI NYTEWAKGKH FYLGDWLYFV YDRNQASVLE VNKTDYETCN SDHPLTNWTR GAGRDVVPLN
101: VTKTYYIISG RGFCFSGMKI AVHVEKLPPP PKAAPVKSAA PTLFSQDRIL LMPVVFAIGA AWDAFIHFW

Best Arabidopsis Sequence Match ( AT5G15350.1 )
(BLAST)

001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW

Arabidopsis Description

ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.