CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12880.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018641_P001	Maize	extracellular	69.08	73.33
Os07t0112700-01	Rice	extracellular	52.17	60.67
TraesCS2B01G279700.1	Wheat	unclear	54.11	57.14
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	51.21	56.08
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	52.17	55.67
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	49.76	52.28
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	40.1	49.4
EER90853	Sorghum	extracellular	35.75	44.05
GSMUA_Achr4P23300_001	Banana	extracellular	34.78	41.38
GSMUA_Achr2P13520_001	Banana	vacuole	35.75	33.48
KXG36173	Sorghum	extracellular	25.12	31.33
CDX96917	Canola	extracellular	20.77	30.94
CDY14895	Canola	extracellular	20.77	30.94
Bra035997.1-P	Field mustard	extracellular	20.29	30.22
CDY37547	Canola	extracellular	24.64	28.81
CDY43265	Canola	plasma membrane	24.15	28.25
Bra039148.1-P	Field mustard	extracellular	24.15	28.25
KRH18432	Soybean	extracellular	22.71	27.81
CDY26419	Canola	extracellular	21.74	27.78
VIT_14s0108g01320.t01	Wine grape	extracellular	21.26	27.67
KRG89877	Soybean	extracellular	21.74	27.61
PGSC0003DMT400003639	Potato	extracellular	20.77	27.04
AT3G01070.1	Thale cress	extracellular	21.74	26.95
CDX78627	Canola	extracellular	21.74	26.47
Bra006297.1-P	Field mustard	extracellular	21.74	26.47
AT2G27035.1	Thale cress	extracellular	20.77	26.38
KXG33437	Sorghum	plastid	26.57	26.32
AT4G12880.1	Thale cress	extracellular	17.87	26.24
Bra021481.1-P	Field mustard	extracellular	22.22	26.14
CDY55798	Canola	extracellular	22.22	26.14
CDY34699	Canola	extracellular	22.22	26.14
CDX70608	Canola	extracellular	21.26	25.88
CDX83251	Canola	extracellular	20.77	25.75
CDY38541	Canola	extracellular	20.77	25.75
VIT_14s0108g01310.t01	Wine grape	extracellular, plasma membrane	21.74	25.57
AT5G15350.1	Thale cress	extracellular	20.77	25.0
Solyc02g088380.2.1	Tomato	extracellular	19.81	24.55
KRH73474	Soybean	extracellular	20.77	24.02
Bra000527.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	19.32	23.95
KRH18434	Soybean	extracellular, plasma membrane	19.81	23.43
PGSC0003DMT400003642	Potato	extracellular, golgi	19.81	23.3
KRG93595	Soybean	extracellular	19.32	22.73
KRH73475	Soybean	extracellular	20.77	21.83

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.2	EntrezGene:8054513	UniProt:C5X780	InterPro:Cupredoxin	EnsemblPlants:EER95743
ProteinID:EER95743	ProteinID:EER95743.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0016020	GO:GO:0022900	GO:GO:0046658	InterPro:IPR003245	InterPro:IPR008972	PFAM:PD003122
PFAM:PF02298	PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF47	InterPro:Phytocyanin_dom	EnsemblPlantsGene:SORBI_3002G007200
SUPFAM:SSF49503	unigene:Sbi.12897	SignalP:SignalP-noTM	UniParc:UPI0001A83418	RefSeq:XP_002459222.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:684684..686117

Molecular Weight (calculated)

21522.7 Da

IEP (calculated)

6.771

GRAVY (calculated)

-0.301

Length

207 amino acids

Sequence
(BLAST)

001: MAATRLALAL LLAAAVAASQ LPAAAVAANY TVGDEKGWNP DVDYTAWVKK HKPFYKGDWL IFQYQNGRSD VVQVDEVGYD NCDKANALSS YSKGSTYAFQ
101: LKEAKDYYFI CSYGYCYHGM KVHVTAKSSG SGSSSSGSGS GSGSSSGDDS SDSSDDDSSS DDSPSPPAKK SKAKSSSAAA PPPSLLAATP RAAAITAAVA
201: LLLNRML

Best Arabidopsis Sequence Match ( AT2G27035.1 )
(BLAST)

001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL

Arabidopsis Description

ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.