Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83251 | Canola | extracellular | 98.8 | 98.8 |
| Bra000527.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 89.22 | 89.22 |
| AT2G27035.1 | Thale cress | extracellular | 62.87 | 64.42 |
| KRG89877 | Soybean | extracellular | 44.91 | 46.01 |
| PGSC0003DMT400003639 | Potato | extracellular | 43.11 | 45.28 |
| Solyc02g088380.2.1 | Tomato | extracellular | 41.32 | 41.32 |
| CDX96917 | Canola | extracellular | 34.13 | 41.01 |
| CDY14895 | Canola | extracellular | 34.13 | 41.01 |
| CDY26419 | Canola | extracellular | 34.73 | 35.8 |
| CDX78627 | Canola | extracellular | 34.13 | 33.53 |
| CDX70608 | Canola | extracellular | 34.13 | 33.53 |
| CDY43265 | Canola | plasma membrane | 33.53 | 31.64 |
| CDY37547 | Canola | extracellular | 32.93 | 31.07 |
| TraesCS3B01G334700.1 | Wheat | extracellular | 19.76 | 30.0 |
| Os03t0758500-01 | Rice | plasma membrane | 29.34 | 29.7 |
| CDY34699 | Canola | extracellular | 31.14 | 29.55 |
| CDY55798 | Canola | extracellular | 31.14 | 29.55 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 31.14 | 29.21 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 29.94 | 28.74 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 28.74 | 28.24 |
| EER90853 | Sorghum | extracellular | 28.14 | 27.98 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 28.74 | 27.91 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 27.54 | 27.88 |
| TraesCS5A01G395600.1 | Wheat | extracellular, plasma membrane | 27.54 | 27.88 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 27.54 | 27.54 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 26.95 | 26.79 |
| Zm00001d043357_P001 | Maize | extracellular | 30.54 | 26.42 |
| TraesCS3A01G301900.1 | Wheat | extracellular | 26.95 | 26.01 |
| Zm00001d018641_P001 | Maize | extracellular | 28.14 | 24.1 |
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 26.35 | 23.28 |
| TraesCS2A01G262400.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 26.95 | 23.2 |
| Os07t0112700-01 | Rice | extracellular | 24.55 | 23.03 |
| KXG33437 | Sorghum | plastid | 28.14 | 22.49 |
| TraesCS2B01G279700.1 | Wheat | unclear | 25.75 | 21.94 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 27.54 | 20.81 |
| EER95743 | Sorghum | extracellular | 25.75 | 20.77 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 23.35 | 19.8 |
| TraesCS5D01G404900.1 | Wheat | plastid | 27.54 | 19.01 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | GO:A0A078HLT1 | UniProt:A0A078HLT1 | EnsemblPlants:CDY38541 | ProteinID:CDY38541 |
| ProteinID:CDY38541.1 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022900 | EnsemblPlantsGene:GSBRNA2T00066200001 | InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PF02298 |
| PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF4 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EE2F15 | SEG:seg | : | : | : |
Description
BnaC03g26560DBnaC03g26560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLT1]
Coordinates
chrLK032425:-:310813..312118
Molecular Weight (calculated)
19137.2 Da
IEP (calculated)
8.784
GRAVY (calculated)
0.034
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIRTIWALL MMMMIIEVES SLHRVGGGKY NWKPDVNFSD WANHQRFYSG DWLYFGFDRT RHNILQVNKS SYEQCIDNDF IFNVTRGGRD VFQLLQPKPY
101: YFICGRGYCL KGMKLSVNVL PQPPPSTTTV PIIPASTANT LIIDSNAFTA IATTILTVFI FKALYFD
101: YFICGRGYCL KGMKLSVNVL PQPPPSTTTV PIIPASTANT LIIDSNAFTA IATTILTVFI FKALYFD
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.