Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G018030.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G12880.1 | HORVU3Hr1G018030.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G395600.1 | Wheat | extracellular, plasma membrane | 97.01 | 98.18 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 96.41 | 97.58 |
| TraesCS5D01G404900.1 | Wheat | plastid | 95.81 | 66.12 |
| Os03t0758500-01 | Rice | plasma membrane | 64.07 | 64.85 |
| EER90853 | Sorghum | extracellular | 64.67 | 64.29 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 48.5 | 46.55 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 45.51 | 45.24 |
| Bra035997.1-P | Field mustard | extracellular | 31.14 | 37.41 |
| CDX96917 | Canola | extracellular | 31.14 | 37.41 |
| CDY14895 | Canola | extracellular | 31.14 | 37.41 |
| AT4G12880.1 | Thale cress | extracellular | 29.94 | 35.46 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 46.11 | 34.84 |
| CDY34699 | Canola | extracellular | 35.93 | 34.09 |
| AT3G01070.1 | Thale cress | extracellular | 33.53 | 33.53 |
| CDY55798 | Canola | extracellular | 35.33 | 33.52 |
| Bra021481.1-P | Field mustard | extracellular | 35.33 | 33.52 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 35.33 | 33.15 |
| CDY43265 | Canola | plasma membrane | 34.73 | 32.77 |
| AT2G27035.1 | Thale cress | extracellular | 31.74 | 32.52 |
| CDY26419 | Canola | extracellular | 31.14 | 32.1 |
| CDY37547 | Canola | extracellular | 33.53 | 31.64 |
| Bra039148.1-P | Field mustard | extracellular | 32.93 | 31.07 |
| AT5G15350.1 | Thale cress | extracellular | 31.74 | 30.81 |
| Bra006297.1-P | Field mustard | extracellular | 31.14 | 30.59 |
| CDX78627 | Canola | extracellular | 31.14 | 30.59 |
| CDX70608 | Canola | extracellular | 31.14 | 30.59 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 35.93 | 30.46 |
| VIT_14s0108g01320.t01 | Wine grape | extracellular | 28.74 | 30.19 |
| KRH18432 | Soybean | extracellular | 30.54 | 30.18 |
| VIT_14s0108g01310.t01 | Wine grape | extracellular, plasma membrane | 31.74 | 30.11 |
| PGSC0003DMT400003639 | Potato | extracellular | 27.54 | 28.93 |
| Solyc02g088380.2.1 | Tomato | extracellular | 28.14 | 28.14 |
| PGSC0003DMT400003642 | Potato | extracellular, golgi | 29.34 | 27.84 |
| CDX83251 | Canola | extracellular | 27.54 | 27.54 |
| CDY38541 | Canola | extracellular | 27.54 | 27.54 |
| KRG89877 | Soybean | extracellular | 25.75 | 26.38 |
| Bra000527.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 25.75 | 25.75 |
| KRG93595 | Soybean | extracellular | 26.95 | 25.57 |
| KRH73474 | Soybean | extracellular | 23.95 | 22.35 |
| KRH73475 | Soybean | extracellular | 25.75 | 21.83 |
| KRH18434 | Soybean | extracellular, plasma membrane | 22.16 | 21.14 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.2 | UniProt:A0A287SE85 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 |
| EnsemblPlantsGene:HORVU5Hr1G096540 | EnsemblPlants:HORVU5Hr1G096540.1 | InterPro:IPR003245 | InterPro:IPR008972 | PFAM:PD003122 | PFAM:PF02298 |
| PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF56 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI000B463075 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:601534103..601534779
Molecular Weight (calculated)
18101.5 Da
IEP (calculated)
9.106
GRAVY (calculated)
-0.087
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: GAMERRRAAW AAVLVAVAAC AALPATTTAN KIKVNWLPNT NYSGWEQEHG PFYKGDWLVF YYTAGQADVV EVNESGYNRC DASNAIYNYS KGRSFAFELN
101: ETKTYYFICS FGYCPGGMRL AIKSQNLPPP SPPPSAQHHR SAALAGPRAG VALHAAVAVL ASLLRLV
101: ETKTYYFICS FGYCPGGMRL AIKSQNLPPP SPPPSAQHHR SAALAGPRAG VALHAAVAVL ASLLRLV
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.