Factsheet for Bra035997.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra024839.1-P
Bra024840.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12880.1	Bra024839.1-P	AT2G01950.1	19000166
AT4G12880.1	Bra024840.1-P	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96917	Canola	extracellular	98.56	98.56
CDY14895	Canola	extracellular	98.56	98.56
AT4G12880.1	Thale cress	extracellular	76.26	75.18
Bra006297.1-P	Field mustard	extracellular	77.7	63.53
KRH18432	Soybean	extracellular	61.87	50.89
Bra021481.1-P	Field mustard	extracellular	62.59	49.43
Bra039148.1-P	Field mustard	extracellular	57.55	45.2
VIT_14s0108g01320.t01	Wine grape	extracellular	46.76	40.88
PGSC0003DMT400003642	Potato	extracellular, golgi	49.64	39.2
TraesCS3B01G334700.1	Wheat	extracellular	30.94	39.09
Bra000527.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	41.01	34.13
TraesCS5B01G400400.1	Wheat	extracellular, plasma membrane	38.13	32.12
TraesCS5A01G395600.1	Wheat	extracellular, plasma membrane	37.41	31.52
HORVU5Hr1G096540.1	Barley	plasma membrane	37.41	31.14
TraesCS3D01G300100.1	Wheat	extracellular	37.41	30.23
HORVU3Hr1G074100.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	38.13	29.78
Os03t0758500-01	Rice	plasma membrane	34.53	29.09
TraesCS3A01G301900.1	Wheat	extracellular	35.97	28.9
GSMUA_Achr4P23300_001	Banana	extracellular	35.97	28.74
EER90853	Sorghum	extracellular	34.53	28.57
GSMUA_Achr4P23310_001	Banana	extracellular	34.53	28.24
Zm00001d043357_P001	Maize	extracellular	34.53	24.87
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	33.81	24.87
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	29.5	24.4
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	33.81	24.23
Os07t0112700-01	Rice	extracellular	30.94	24.16
TraesCS2B01G279700.1	Wheat	unclear	33.09	23.47
Zm00001d018641_P001	Maize	extracellular	31.65	22.56
TraesCS5D01G404900.1	Wheat	plastid	38.13	21.9
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	30.94	21.83
GSMUA_Achr2P13520_001	Banana	vacuole	33.09	20.81
KXG33437	Sorghum	plastid	30.94	20.57
EER95743	Sorghum	extracellular	30.22	20.29

Protein Annotations

Gene3D:2.60.40.420	MapMan:35.1	EnsemblPlantsGene:Bra035997	EnsemblPlants:Bra035997.1	EnsemblPlants:Bra035997.1-P	InterPro:Cupredoxin
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005576	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0022900	GO:GO:0048046	InterPro:IPR003245
InterPro:IPR008972	UniProt:M4F4J7	PFAM:PD003122	PFAM:PF02298	PFscan:PS51485	PANTHER:PTHR33021
PANTHER:PTHR33021:SF63	InterPro:Phytocyanin_dom	SUPFAM:SSF49503	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253E666
SEG:seg	:	:	:	:	:

Description

AT5G15350 (E=5e-056) | plastocyanin-like domain-containing protein

Coordinates

chrScaffold000111:+:379299..380050

Molecular Weight (calculated)

16027.5 Da

IEP (calculated)

9.722

GRAVY (calculated)

-0.238

Length

139 amino acids

Sequence
(BLAST)

001: MARFTVLIAA AILAFLVAAP VPEVTAKKYL VGDKKFWNPY INYDTWVQGK HFYLGDWLYF VYYRDQHNIL EVNKTDYERC ISDHPIRNYT RGAGRDIVPL
101: NVTKQYYLLD GRGGCFKGMK LTVTVEKLPP PPKSAPVKH

Best Arabidopsis Sequence Match ( AT5G15350.1 )
(BLAST)

001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW

Arabidopsis Description

ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.