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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:golgi
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
plasma membrane: 18260611
extracellular: 18372294
plasma membrane: 19502382
nucleus: 19621931
extracellular: 24083427
plasma membrane: 27800704
extracellular: 28232208
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 19502382 doi
M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID: 18260611 doi
SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic
Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
msms PMID: 18372294 doi
T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa
Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.
msms PMID: 19621931 doi
T Aki, S Yanagisawa
Department of Applied Biological Chemistry, The University of Tokyo, Japan.
msms PMID: 28232208 doi
Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G12880.1 Os10t0114400-01 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G063510.2 Barley extracellular, mitochondrion 69.1 62.44
TraesCS2D01G261600.1 Wheat cytosol, extracellular, mitochondrion, peroxisome 66.29 62.43
TraesCS2B01G279700.1 Wheat unclear 67.98 61.73
TraesCS2A01G262400.1 Wheat endoplasmic reticulum, extracellular, mitochondrion, peroxisome 66.85 61.34
Zm00001d018641_P001 Maize extracellular 66.29 60.51
EER95743 Sorghum extracellular 60.67 52.17
GSMUA_Achr9P09440_001 Banana endoplasmic reticulum, extracellular, plasma membrane 44.38 47.02
GSMUA_Achr4P23300_001 Banana extracellular 41.01 41.95
Os03t0758500-01 Rice plasma membrane 38.2 41.21
GSMUA_Achr2P13520_001 Banana vacuole 42.13 33.94
CDX96917 Canola extracellular 24.72 31.65
CDY14895 Canola extracellular 24.72 31.65
Bra035997.1-P Field mustard extracellular 24.16 30.94
Os09t0557900-01 Rice extracellular 28.65 30.36
AT3G01070.1 Thale cress extracellular 26.97 28.74
AT4G12880.1 Thale cress extracellular 22.47 28.37
PGSC0003DMT400003639 Potato extracellular 25.28 28.3
VIT_14s0108g01310.t01 Wine grape extracellular, plasma membrane 26.97 27.27
CDY37547 Canola extracellular 26.97 27.12
CDY43265 Canola plasma membrane 26.97 27.12
VIT_14s0108g01320.t01 Wine grape extracellular 24.16 27.04
AT2G27035.1 Thale cress extracellular 24.72 26.99
Solyc02g088380.2.1 Tomato extracellular 25.28 26.95
Bra039148.1-P Field mustard extracellular 26.4 26.55
KRG89877 Soybean extracellular 24.16 26.38
KRH73474 Soybean extracellular 25.84 25.7
CDY55798 Canola extracellular 25.28 25.57
CDY34699 Canola extracellular 25.28 25.57
Bra021481.1-P Field mustard extracellular 25.28 25.57
CDY26419 Canola extracellular 23.03 25.31
CDX78627 Canola extracellular 24.16 25.29
Bra006297.1-P Field mustard extracellular 24.16 25.29
Bra000527.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 23.6 25.15
AT5G15350.1 Thale cress extracellular 24.16 25.0
KRH18432 Soybean extracellular 23.6 24.85
CDX70608 Canola extracellular 23.6 24.71
CDX83251 Canola extracellular 23.03 24.55
CDY38541 Canola extracellular 23.03 24.55
PGSC0003DMT400003642 Potato extracellular, golgi 23.03 23.3
KRG93595 Soybean extracellular 22.47 22.73
KRH73475 Soybean extracellular 24.16 21.83
KRH18434 Soybean extracellular, plasma membrane 21.35 21.71
Protein Annotations
Gene3D:2.60.40.420MapMan:35.2EMBL:AK073121ProteinID:BAC22293.2ProteinID:BAD31225.1ProteinID:BAF20659.1
ProteinID:BAS99778.1InterPro:CupredoxinProteinID:EEE66458.1GO:GO:0003674GO:GO:0003824GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0022900GO:GO:0046658InterPro:IPR003245
InterPro:IPR008972EnsemblPlantsGene:Os07g0112700EnsemblPlants:Os07t0112700-01PFAM:PD003122PFAM:PF02298PFscan:PS51485
PANTHER:PTHR33021PANTHER:PTHR33021:SF47InterPro:Phytocyanin_domUniProt:Q7F1H3SUPFAM:SSF49503SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0000212F7BSEG:seg:::
Description
EARLY NODULIN LIKE PROTEIN 19Cupredoxin domain containing protein. (Os07t0112700-01)
Coordinates
chr7:-:699881..700826
Molecular Weight (calculated)
19211.6 Da
IEP (calculated)
8.793
GRAVY (calculated)
-0.136
Length
178 amino acids
Sequence
(BLAST)
001: MVCHRMLPLL VVAVALLPAA AVATNYTVGD EKGWNPDVDY TAWVKKHRPF YKGDWLLFEY QNGRSDVVQV DEVGYDNCDK ANAISSYSKG HSYAFQLKEA
101: KDYYFICSYG YCYKGMKLAV TAKKGSASSS SSGSGDSSSS SKSDTASSKS KSSAAASSLA NPSYAALLAV AIIFLRML
Best Arabidopsis Sequence Match ( AT2G27035.1 )
(BLAST)
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.