Subcellular Localization
min:
: max
Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 5
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83251 | Canola | extracellular | 90.42 | 90.42 |
| CDY38541 | Canola | extracellular | 89.22 | 89.22 |
| AT2G27035.1 | Thale cress | extracellular | 61.68 | 63.19 |
| KRG89877 | Soybean | extracellular | 44.31 | 45.4 |
| PGSC0003DMT400003639 | Potato | extracellular | 43.11 | 45.28 |
| Bra035997.1-P | Field mustard | extracellular | 34.13 | 41.01 |
| Solyc02g088380.2.1 | Tomato | extracellular | 40.72 | 40.72 |
| Bra006297.1-P | Field mustard | extracellular | 34.13 | 33.53 |
| Bra039148.1-P | Field mustard | extracellular | 31.74 | 29.94 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 31.14 | 29.21 |
| Bra021481.1-P | Field mustard | extracellular | 30.54 | 28.98 |
| TraesCS3B01G334700.1 | Wheat | extracellular | 18.56 | 28.18 |
| EER90853 | Sorghum | extracellular | 27.54 | 27.38 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 28.14 | 27.01 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 26.95 | 26.79 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 27.54 | 26.74 |
| Os03t0758500-01 | Rice | plasma membrane | 26.35 | 26.67 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 26.95 | 26.47 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 25.75 | 26.06 |
| TraesCS5A01G395600.1 | Wheat | extracellular, plasma membrane | 25.75 | 26.06 |
| Zm00001d043357_P001 | Maize | extracellular | 29.94 | 25.91 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 25.75 | 25.75 |
| TraesCS3A01G301900.1 | Wheat | extracellular | 26.35 | 25.43 |
| Os07t0112700-01 | Rice | extracellular | 25.15 | 23.6 |
| Zm00001d018641_P001 | Maize | extracellular | 27.54 | 23.59 |
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 26.35 | 23.28 |
| TraesCS2A01G262400.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 26.95 | 23.2 |
| TraesCS2B01G279700.1 | Wheat | unclear | 25.75 | 21.94 |
| KXG33437 | Sorghum | plastid | 26.35 | 21.05 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 23.95 | 20.3 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 26.35 | 19.91 |
| EER95743 | Sorghum | extracellular | 23.95 | 19.32 |
| TraesCS5D01G404900.1 | Wheat | plastid | 25.75 | 17.77 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | EnsemblPlantsGene:Bra000527 | EnsemblPlants:Bra000527.1 | EnsemblPlants:Bra000527.1-P | InterPro:Cupredoxin |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022900 | InterPro:IPR003245 |
| InterPro:IPR008972 | UniProt:M4C8J9 | PFAM:PD003122 | PFAM:PF02298 | PFscan:PS51485 | PANTHER:PTHR33021 |
| PANTHER:PTHR33021:SF4 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000254003A |
| SEG:seg | : | : | : | : | : |
Description
AT2G27035 (E=2e-057) | plastocyanin-like domain-containing protein
Coordinates
chrA03:+:11587856..11588957
Molecular Weight (calculated)
18995.0 Da
IEP (calculated)
8.449
GRAVY (calculated)
0.037
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIRTIGALL MMMMIIEVES SLHRVGGGKY NWKPDVNFSD WANHQRFYSG DWLYFGFDRT RHNILQVNKS SYEQCIDNDF IFNVTRGGRD VFQLLQPKPY
101: YFICGRGYCL KGMKLSVNVL PQPPPSTSTV PIIPASTANT LIIDSDAFTA IATTILTVFI FKALYFD
101: YFICGRGYCL KGMKLSVNVL PQPPPSTSTV PIIPASTANT LIIDSDAFTA IATTILTVFI FKALYFD
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.