Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Zm00001d000055_P001 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G12880.1 | Zm00001d000055_P001 | AT2G01950.1 | 19000166 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G334700.1 | Wheat | extracellular | 33.68 | 59.09 |
KXG33437 | Sorghum | plastid | 56.99 | 52.63 |
TraesCS3D01G300100.1 | Wheat | extracellular | 44.56 | 50.0 |
TraesCS3A01G301900.1 | Wheat | extracellular | 43.01 | 47.98 |
GSMUA_Achr4P23310_001 | Banana | extracellular | 41.45 | 47.06 |
HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 43.01 | 46.63 |
AT4G12880.1 | Thale cress | extracellular | 26.94 | 36.88 |
Bra035997.1-P | Field mustard | extracellular | 24.87 | 34.53 |
CDX96917 | Canola | extracellular | 24.87 | 34.53 |
CDY14895 | Canola | extracellular | 24.87 | 34.53 |
AT3G01070.1 | Thale cress | extracellular | 29.53 | 34.13 |
VIT_14s0108g01320.t01 | Wine grape | extracellular | 27.98 | 33.96 |
CDY55798 | Canola | extracellular | 30.05 | 32.95 |
CDY34699 | Canola | extracellular | 30.05 | 32.95 |
Bra021481.1-P | Field mustard | extracellular | 30.05 | 32.95 |
Bra039148.1-P | Field mustard | extracellular | 30.05 | 32.77 |
KRH18432 | Soybean | extracellular | 28.5 | 32.54 |
Solyc02g088380.2.1 | Tomato | extracellular | 27.98 | 32.34 |
CDY37547 | Canola | extracellular | 29.53 | 32.2 |
CDX83251 | Canola | extracellular | 26.42 | 30.54 |
CDY38541 | Canola | extracellular | 26.42 | 30.54 |
CDY43265 | Canola | plasma membrane | 27.98 | 30.51 |
AT2G27035.1 | Thale cress | extracellular | 25.39 | 30.06 |
Bra000527.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 25.91 | 29.94 |
Zm00001d018641_P001 | Maize | extracellular | 30.05 | 29.74 |
PGSC0003DMT400003639 | Potato | extracellular | 24.35 | 29.56 |
CDY26419 | Canola | extracellular | 24.35 | 29.01 |
VIT_14s0108g01310.t01 | Wine grape | extracellular, plasma membrane | 26.42 | 28.98 |
KRG89877 | Soybean | extracellular | 24.35 | 28.83 |
AT5G15350.1 | Thale cress | extracellular | 25.39 | 28.49 |
Zm00001d021391_P001 | Maize | extracellular | 24.35 | 27.98 |
Bra006297.1-P | Field mustard | extracellular | 23.83 | 27.06 |
CDX78627 | Canola | extracellular | 23.83 | 27.06 |
KRH73474 | Soybean | extracellular | 24.87 | 26.82 |
CDX70608 | Canola | extracellular | 22.8 | 25.88 |
PGSC0003DMT400003642 | Potato | extracellular, golgi | 23.32 | 25.57 |
KRH18434 | Soybean | extracellular, plasma membrane | 21.24 | 23.43 |
KRH73475 | Soybean | extracellular | 23.83 | 23.35 |
KRG93595 | Soybean | extracellular | 20.73 | 22.73 |
Protein Annotations
EntrezGene:100285959 | Gene3D:2.60.40.420 | MapMan:35.1 | UniProt:B6UCC3 | InterPro:Cupredoxin | EMBL:EU974888 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
GO:GO:0009987 | GO:GO:0022900 | InterPro:IPR003245 | InterPro:IPR008972 | ProteinID:ONM37684.1 | PFAM:PD003122 |
PFAM:PF02298 | PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF43 | InterPro:Phytocyanin_dom | SUPFAM:SSF49503 |
SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000182EFF2 | EnsemblPlantsGene:Zm00001d043357 | EnsemblPlants:Zm00001d043357_P001 | EnsemblPlants:Zm00001d043357_T001 |
SEG:seg | : | : | : | : | : |
Description
Blue copper protein
Coordinates
chr3:+:197606520..197607434
Molecular Weight (calculated)
21282.4 Da
IEP (calculated)
9.799
GRAVY (calculated)
0.030
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAARLLLV VVLLSAAIPI PSFATSFVVG DKRHRWAPNV NYTDWADRHQ FHVGDWLEFR YERDRFDVVQ VNETAYAACD ASSPILSYSR GHNFVFRLNH
101: TGRFYFICSR GYCWSGMKVS VLVQPPPPPP SLPPASHSHA SSASARVRPA AGLWCAALST LLGWAVLTPP LSFRVWSSGR PGAHTSLNSK AVC
101: TGRFYFICSR GYCWSGMKVS VLVQPPPPPP SLPPASHSHA SSASARVRPA AGLWCAALST LLGWAVLTPP LSFRVWSSGR PGAHTSLNSK AVC
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.