Skip to main content
crop-pal logo
Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G12880.1 Zm00001d000055_P001 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G334700.1 Wheat extracellular 33.68 59.09
KXG33437 Sorghum plastid 56.99 52.63
TraesCS3D01G300100.1 Wheat extracellular 44.56 50.0
TraesCS3A01G301900.1 Wheat extracellular 43.01 47.98
GSMUA_Achr4P23310_001 Banana extracellular 41.45 47.06
HORVU3Hr1G074100.1 Barley endoplasmic reticulum, plasma membrane, vacuole 43.01 46.63
AT4G12880.1 Thale cress extracellular 26.94 36.88
Bra035997.1-P Field mustard extracellular 24.87 34.53
CDX96917 Canola extracellular 24.87 34.53
CDY14895 Canola extracellular 24.87 34.53
AT3G01070.1 Thale cress extracellular 29.53 34.13
VIT_14s0108g01320.t01 Wine grape extracellular 27.98 33.96
CDY55798 Canola extracellular 30.05 32.95
CDY34699 Canola extracellular 30.05 32.95
Bra021481.1-P Field mustard extracellular 30.05 32.95
Bra039148.1-P Field mustard extracellular 30.05 32.77
KRH18432 Soybean extracellular 28.5 32.54
Solyc02g088380.2.1 Tomato extracellular 27.98 32.34
CDY37547 Canola extracellular 29.53 32.2
CDX83251 Canola extracellular 26.42 30.54
CDY38541 Canola extracellular 26.42 30.54
CDY43265 Canola plasma membrane 27.98 30.51
AT2G27035.1 Thale cress extracellular 25.39 30.06
Bra000527.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 25.91 29.94
Zm00001d018641_P001 Maize extracellular 30.05 29.74
PGSC0003DMT400003639 Potato extracellular 24.35 29.56
CDY26419 Canola extracellular 24.35 29.01
VIT_14s0108g01310.t01 Wine grape extracellular, plasma membrane 26.42 28.98
KRG89877 Soybean extracellular 24.35 28.83
AT5G15350.1 Thale cress extracellular 25.39 28.49
Zm00001d021391_P001 Maize extracellular 24.35 27.98
Bra006297.1-P Field mustard extracellular 23.83 27.06
CDX78627 Canola extracellular 23.83 27.06
KRH73474 Soybean extracellular 24.87 26.82
CDX70608 Canola extracellular 22.8 25.88
PGSC0003DMT400003642 Potato extracellular, golgi 23.32 25.57
KRH18434 Soybean extracellular, plasma membrane 21.24 23.43
KRH73475 Soybean extracellular 23.83 23.35
KRG93595 Soybean extracellular 20.73 22.73
Protein Annotations
EntrezGene:100285959Gene3D:2.60.40.420MapMan:35.1UniProt:B6UCC3InterPro:CupredoxinEMBL:EU974888
GO:GO:0003674GO:GO:0003824GO:GO:0006091GO:GO:0008150GO:GO:0008152GO:GO:0009055
GO:GO:0009987GO:GO:0022900InterPro:IPR003245InterPro:IPR008972ProteinID:ONM37684.1PFAM:PD003122
PFAM:PF02298PFscan:PS51485PANTHER:PTHR33021PANTHER:PTHR33021:SF43InterPro:Phytocyanin_domSUPFAM:SSF49503
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000182EFF2EnsemblPlantsGene:Zm00001d043357EnsemblPlants:Zm00001d043357_P001EnsemblPlants:Zm00001d043357_T001
SEG:seg:::::
Description
Blue copper protein
Coordinates
chr3:+:197606520..197607434
Molecular Weight (calculated)
21282.4 Da
IEP (calculated)
9.799
GRAVY (calculated)
0.030
Length
193 amino acids
Sequence
(BLAST)
001: MATAARLLLV VVLLSAAIPI PSFATSFVVG DKRHRWAPNV NYTDWADRHQ FHVGDWLEFR YERDRFDVVQ VNETAYAACD ASSPILSYSR GHNFVFRLNH
101: TGRFYFICSR GYCWSGMKVS VLVQPPPPPP SLPPASHSHA SSASARVRPA AGLWCAALST LLGWAVLTPP LSFRVWSSGR PGAHTSLNSK AVC
Best Arabidopsis Sequence Match ( AT2G27035.1 )
(BLAST)
001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL
Arabidopsis Description
ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.