Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G12880.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G12880.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96917 | Canola | extracellular | 100.0 | 100.0 |
| Bra035997.1-P | Field mustard | extracellular | 98.56 | 98.56 |
| AT4G12880.1 | Thale cress | extracellular | 76.98 | 75.89 |
| CDY26419 | Canola | extracellular | 81.3 | 69.75 |
| CDX70608 | Canola | extracellular | 76.98 | 62.94 |
| CDX78627 | Canola | extracellular | 76.98 | 62.94 |
| KRH18432 | Soybean | extracellular | 61.87 | 50.89 |
| CDY34699 | Canola | extracellular | 63.31 | 50.0 |
| CDY55798 | Canola | extracellular | 63.31 | 50.0 |
| CDY43265 | Canola | plasma membrane | 58.27 | 45.76 |
| CDY37547 | Canola | extracellular | 58.27 | 45.76 |
| VIT_14s0108g01320.t01 | Wine grape | extracellular | 46.76 | 40.88 |
| PGSC0003DMT400003642 | Potato | extracellular, golgi | 50.36 | 39.77 |
| TraesCS3B01G334700.1 | Wheat | extracellular | 30.94 | 39.09 |
| CDY38541 | Canola | extracellular | 41.01 | 34.13 |
| CDX83251 | Canola | extracellular | 41.01 | 34.13 |
| TraesCS5B01G400400.1 | Wheat | extracellular, plasma membrane | 38.13 | 32.12 |
| TraesCS5A01G395600.1 | Wheat | extracellular, plasma membrane | 37.41 | 31.52 |
| HORVU5Hr1G096540.1 | Barley | plasma membrane | 37.41 | 31.14 |
| TraesCS3D01G300100.1 | Wheat | extracellular | 37.41 | 30.23 |
| HORVU3Hr1G074100.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 38.13 | 29.78 |
| Os03t0758500-01 | Rice | plasma membrane | 35.25 | 29.7 |
| TraesCS3A01G301900.1 | Wheat | extracellular | 35.97 | 28.9 |
| GSMUA_Achr4P23300_001 | Banana | extracellular | 35.97 | 28.74 |
| EER90853 | Sorghum | extracellular | 34.53 | 28.57 |
| GSMUA_Achr4P23310_001 | Banana | extracellular | 34.53 | 28.24 |
| TraesCS2D01G261600.1 | Wheat | cytosol, extracellular, mitochondrion, peroxisome | 34.53 | 25.4 |
| Zm00001d043357_P001 | Maize | extracellular | 34.53 | 24.87 |
| TraesCS2A01G262400.1 | Wheat | endoplasmic reticulum, extracellular, mitochondrion, peroxisome | 34.53 | 24.74 |
| Os07t0112700-01 | Rice | extracellular | 31.65 | 24.72 |
| GSMUA_Achr9P09440_001 | Banana | endoplasmic reticulum, extracellular, plasma membrane | 29.5 | 24.4 |
| TraesCS2B01G279700.1 | Wheat | unclear | 33.81 | 23.98 |
| Zm00001d018641_P001 | Maize | extracellular | 32.37 | 23.08 |
| TraesCS5D01G404900.1 | Wheat | plastid | 38.13 | 21.9 |
| HORVU2Hr1G063510.2 | Barley | extracellular, mitochondrion | 30.94 | 21.83 |
| GSMUA_Achr2P13520_001 | Banana | vacuole | 33.09 | 20.81 |
| EER95743 | Sorghum | extracellular | 30.94 | 20.77 |
| KXG33437 | Sorghum | plastid | 30.94 | 20.57 |
Protein Annotations
| Gene3D:2.60.40.420 | MapMan:35.1 | GO:A0A078FKC5 | UniProt:A0A078FKC5 | EnsemblPlants:CDY14895 | ProteinID:CDY14895 |
| ProteinID:CDY14895.1 | InterPro:Cupredoxin | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0022900 | EnsemblPlantsGene:GSBRNA2T00084802001 | InterPro:IPR003245 |
| InterPro:IPR008972 | PFAM:PD003122 | PFAM:PF02298 | PFscan:PS51485 | PANTHER:PTHR33021 | PANTHER:PTHR33021:SF63 |
| InterPro:Phytocyanin_dom | SUPFAM:SSF49503 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EB0F0A | SEG:seg |
Description
BnaA02g22370DBnaA02g22370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKC5]
Coordinates
chrLK032048:+:263653..264717
Molecular Weight (calculated)
15965.4 Da
IEP (calculated)
9.619
GRAVY (calculated)
-0.256
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MARFTVLIAA AVLAFLVAAP VPEVTAKKYL VGDKKFWNPD INYDTWVQGK HFYLGDWLYF VYYRDQHNIL EVNKTDYERC ISDHPIRNYT RGAGRDIVPL
101: NVTKQYYLLD GRGGCFKGMK LTVTVEKLPP PPKSAPVKH
101: NVTKQYYLLD GRGGCFKGMK LTVTVEKLPP PPKSAPVKH
001: MARFTVLITA VVLAFLMAAP MPGVTAKKYT VGENKFWNPN INYTIWAQGK HFYLGDWLYF VFDRNQHNIL EVNKTDYEGC IADHPIRNWT RGAGRDIVTL
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW
101: NQTKHYYLLD GKGGCYGGMK LSVKVEKLPP PPKSAPVKNI GSVSMVTGLA QFMIPVSLFA FPAMWDVISR MW
Arabidopsis Description
ENODL17Lamin-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q39131]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.