Factsheet for Zm00001d018641_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

extracellular: 20408568
plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000055_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G12880.1	Zm00001d000055_P001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER95743	Sorghum	extracellular	73.33	69.08
Os07t0112700-01	Rice	extracellular	60.51	66.29
TraesCS2B01G279700.1	Wheat	unclear	61.03	60.71
TraesCS2D01G261600.1	Wheat	cytosol, extracellular, mitochondrion, peroxisome	58.46	60.32
TraesCS2A01G262400.1	Wheat	endoplasmic reticulum, extracellular, mitochondrion, peroxisome	59.49	59.79
HORVU2Hr1G063510.2	Barley	extracellular, mitochondrion	53.33	52.79
GSMUA_Achr9P09440_001	Banana	endoplasmic reticulum, extracellular, plasma membrane	42.56	49.4
GSMUA_Achr4P23300_001	Banana	extracellular	36.41	40.8
GSMUA_Achr2P13520_001	Banana	vacuole	37.44	33.03
CDX96917	Canola	extracellular	23.08	32.37
CDY14895	Canola	extracellular	23.08	32.37
Bra035997.1-P	Field mustard	extracellular	22.56	31.65
Zm00001d021391_P001	Maize	extracellular	26.15	30.36
VIT_14s0108g01320.t01	Wine grape	extracellular	24.62	30.19
Zm00001d043357_P001	Maize	extracellular	29.74	30.05
CDY37547	Canola	extracellular	27.18	29.94
AT3G01070.1	Thale cress	extracellular	25.64	29.94
AT2G27035.1	Thale cress	extracellular	24.62	29.45
CDY43265	Canola	plasma membrane	26.67	29.38
Bra039148.1-P	Field mustard	extracellular	26.67	29.38
CDY26419	Canola	extracellular	24.1	29.01
PGSC0003DMT400003639	Potato	extracellular	23.59	28.93
CDX83251	Canola	extracellular	24.62	28.74
KRG89877	Soybean	extracellular	23.59	28.22
CDY38541	Canola	extracellular	24.1	28.14
CDY55798	Canola	extracellular	25.13	27.84
CDY34699	Canola	extracellular	25.13	27.84
Bra021481.1-P	Field mustard	extracellular	25.13	27.84
KRH18432	Soybean	extracellular	24.1	27.81
Bra006297.1-P	Field mustard	extracellular	24.1	27.65
CDX70608	Canola	extracellular	24.1	27.65
CDX78627	Canola	extracellular	24.1	27.65
Bra000527.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	23.59	27.54
VIT_14s0108g01310.t01	Wine grape	extracellular, plasma membrane	24.62	27.27
AT4G12880.1	Thale cress	extracellular	19.49	26.95
Solyc02g088380.2.1	Tomato	extracellular	23.08	26.95
AT5G15350.1	Thale cress	extracellular	22.05	25.0
KRH73474	Soybean	extracellular	22.05	24.02
PGSC0003DMT400003642	Potato	extracellular, golgi	21.54	23.86
KRH18434	Soybean	extracellular, plasma membrane	19.49	21.71
KRH73475	Soybean	extracellular	21.03	20.81
KRG93595	Soybean	extracellular	17.95	19.89

Protein Annotations

EntrezGene:100274039	Gene3D:2.60.40.420	MapMan:35.2	UniProt:B4FYQ7	EMBL:BT042245	EMBL:BT042979
EMBL:BT065382	InterPro:Cupredoxin	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0022900	InterPro:IPR003245	InterPro:IPR008972	ProteinID:ONM51012.1	PFAM:PD003122	PFAM:PF02298
PFscan:PS51485	PANTHER:PTHR33021	PANTHER:PTHR33021:SF47	InterPro:Phytocyanin_dom	SUPFAM:SSF49503	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00017B775A	EnsemblPlantsGene:Zm00001d018641	EnsemblPlants:Zm00001d018641_P001	EnsemblPlants:Zm00001d018641_T001	SEG:seg

Description

early nodulin-like protein 16

Coordinates

chr7:+:1462744..1464165

Molecular Weight (calculated)

20620.0 Da

IEP (calculated)

8.025

GRAVY (calculated)

-0.227

Length

195 amino acids

Sequence
(BLAST)

001: MAATSRLALA LLLAALVAAW QLPAAAVAAN YTVGDEKGWN PDVDYTAWVK KHKPFYKGDW LIFEYQNGRS DVVQVDEVGY DNCDKANALS SYSKGHTYAF
101: QLKDAKDYYF ICSYGYCYNG MKLHVTAKSS SSSSSSSSGS DSSSSSSDDD SSSPSPPAKK SKAKTSAAPP PSLLAATPMA AAAAAAAALL LNRML

Best Arabidopsis Sequence Match ( AT2G27035.1 )
(BLAST)

001: MMGKYLWALV YVTVMILIIV VEVESSLHRV GGGRYTWNSD VNFSDWANHQ RFYSGDWLYF GFNRTRHNIL QVNKSSYEQC VDNDYIFNIT RGGRDVFQLL
101: EPKPYYFICG RGYCLKGMKL AITVLPQPPP SAPTNFTSTT TPLIPPNAIT AAILIFAFKA LLL

Arabidopsis Description

ENODL20Early nodulin-like protein 20 [Source:UniProtKB/TrEMBL;Acc:F4IVN9]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.