Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76715 | Canola | nucleus | 18.83 | 45.31 |
| CDY11489 | Canola | nucleus | 25.97 | 44.94 |
| CDY24740 | Canola | nucleus | 18.18 | 43.75 |
| CDX76718 | Canola | nucleus | 24.03 | 40.22 |
| VIT_07s0129g00650.t01 | Wine grape | cytosol | 15.58 | 38.71 |
| VIT_19s0014g00310.t01 | Wine grape | nucleus | 18.18 | 35.9 |
| AT2G26320.1 | Thale cress | nucleus | 24.03 | 33.95 |
| VIT_18s0001g04810.t01 | Wine grape | nucleus | 20.78 | 32.99 |
| CDX76713 | Canola | nucleus | 29.22 | 30.61 |
| CDX76717 | Canola | nucleus | 34.42 | 29.94 |
| VIT_17s0000g06340.t01 | Wine grape | nucleus | 37.01 | 15.2 |
| VIT_18s0001g09540.t01 | Wine grape | nucleus | 28.57 | 13.66 |
| VIT_07s0031g01140.t01 | Wine grape | nucleus | 25.32 | 11.54 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | ProteinID:CCB46612 | ProteinID:CCB46612.1 | ncoils:Coil | UniProt:F6H2S7 |
| EMBL:FN595231 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF169 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002109A7C |
| ArrayExpress:VIT_04s0008g01980 | EnsemblPlantsGene:VIT_04s0008g01980 | EnsemblPlants:VIT_04s0008g01980.t01 | : | : | : |
Description
No Description!
Coordinates
chr4:-:1588078..1591232
Molecular Weight (calculated)
17801.7 Da
IEP (calculated)
10.589
GRAVY (calculated)
-0.619
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRRKLSIRR LQSGRERQAK YSQRKQGILR KANDLAVLCD TDVLLLMFSP TGKPCLTVGQ NKNLLTVMER LASLSVDYRE ERAAYTLELL AKMHRRLNSD
101: VDQKNFSLDS NEILQLKRSE LEQLRSQLAE KSKAMSQELI QRMNVAVTLK HQQE
101: VDQKNFSLDS NEILQLKRSE LEQLRSQLAE KSKAMSQELI QRMNVAVTLK HQQE
001: MGRVKLKIKK LENTNGRQST FAKRKNGILK KANELSILCD IDIVLLMFSP TGKAAICCGT RSSMEEVIAK FSQVTPQERT KRKFESLENL KKTFQKLDHD
101: VNIREFIASS NSTVEDLSTQ ARILQARISE IHGRLSYWTE PDKINNVEHL GQLEISIRQS LDQLRAHKEH FGQQQQAMQI ENANFVKDWS TCSMQDGIQI
201: PLEQQLQSMS WILNSNTTNI VTEEHNSIPQ REVECSASSS FGSYPGYFGT GKSPEMTIPG QETSFLDELN TGQLKQDTSS QQQFTNNNNI TAYNPNLHND
301: MNHHQTLPPP PLPLTLPHAQ VYIPMNQREY HMNGFFEAPP PDSSAYNDNT NQTRFGSSSS SLPCSISMFD EYLFSQVTKT KLSQRF
101: VNIREFIASS NSTVEDLSTQ ARILQARISE IHGRLSYWTE PDKINNVEHL GQLEISIRQS LDQLRAHKEH FGQQQQAMQI ENANFVKDWS TCSMQDGIQI
201: PLEQQLQSMS WILNSNTTNI VTEEHNSIPQ REVECSASSS FGSYPGYFGT GKSPEMTIPG QETSFLDELN TGQLKQDTSS QQQFTNNNNI TAYNPNLHND
301: MNHHQTLPPP PLPLTLPHAQ VYIPMNQREY HMNGFFEAPP PDSSAYNDNT NQTRFGSSSS SLPCSISMFD EYLFSQVTKT KLSQRF
Arabidopsis Description
AGL30Agamous-like MADS-box protein AGL30 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.