Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76715 | Canola | nucleus | 40.37 | 68.75 |
| CDY24740 | Canola | nucleus | 40.37 | 68.75 |
| CDY11489 | Canola | nucleus | 48.62 | 59.55 |
| CDX76718 | Canola | nucleus | 47.71 | 56.52 |
| CDX76713 | Canola | nucleus | 48.62 | 36.05 |
| CDX76717 | Canola | nucleus | 50.46 | 31.07 |
| VIT_04s0008g01980.t01 | Wine grape | mitochondrion | 33.95 | 24.03 |
| AT4G37435.1 | Thale cress | nucleus | 29.36 | 17.2 |
| AT1G77950.4 | Thale cress | nucleus | 36.7 | 15.87 |
| AT1G22130.1 | Thale cress | nucleus | 34.86 | 11.34 |
| AT1G77980.1 | Thale cress | nucleus | 33.95 | 11.14 |
| AT2G03060.2 | Thale cress | nucleus | 32.11 | 9.07 |
| AT1G18750.3 | Thale cress | nucleus | 33.03 | 8.72 |
| AT1G69540.2 | Thale cress | nucleus | 27.52 | 8.17 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:817172 | ProteinID:AAC14519.1 | ProteinID:AEC07824.1 | Symbol:AGL33 |
| ArrayExpress:AT2G26320 | EnsemblPlantsGene:AT2G26320 | RefSeq:AT2G26320 | TAIR:AT2G26320 | RefSeq:AT2G26320-TAIR-G | EnsemblPlants:AT2G26320.1 |
| TAIR:AT2G26320.1 | EMBL:AY141233 | Unigene:At.38911 | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 |
| InterPro:IPR002100 | InterPro:IPR036879 | InterPro:MADS_SRF-like | RefSeq:NP_180200.1 | UniProt:O64840 | PFAM:PF00319 |
| PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF156 | SMART:SM00432 | SUPFAM:SSF55455 |
| InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00000A41B9 | SEG:seg | : | : |
Description
AGL33AGAMOUS-like 33 [Source:UniProtKB/TrEMBL;Acc:O64840]
Coordinates
chr2:-:11205389..11206287
Molecular Weight (calculated)
12976.2 Da
IEP (calculated)
10.769
GRAVY (calculated)
-0.560
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRTIKNKNK QIVKENMGRK KLKLKRIESL KERSSKFSKR KKGLFKKAEE VALLCDSDIM LIVVSPTEKP TVFNTRSRSF HTILERFCML SLQEREERCD
101: LSYFYIIIT
101: LSYFYIIIT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.