Factsheet for AT2G03060.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024792.1-P	Field mustard	nucleus	79.79	81.7
CDY45183	Canola	nucleus	79.53	81.43
Bra017404.1-P	Field mustard	nucleus	77.98	79.42
CDY03021	Canola	nucleus	79.02	77.81
CDY60833	Canola	nucleus	78.76	71.7
CDY17422	Canola	nucleus	77.98	61.3
GSMUA_Achr11P...	Banana	nucleus	26.42	44.74
AT1G69540.2	Thale cress	nucleus	39.64	41.69
GSMUA_Achr3P24170_001	Banana	nucleus	38.34	41.46
GSMUA_Achr2P01740_001	Banana	nucleus	35.49	40.18
KXG29049	Sorghum	nucleus	38.34	39.05
TraesCS4B01G150200.1	Wheat	nucleus	37.31	37.02
TraesCS4D01G147000.1	Wheat	nucleus	37.05	36.76
HORVU4Hr1G032440.7	Barley	nucleus	36.79	36.69
TraesCS4A01G169000.1	Wheat	nucleus	36.53	36.43
AT1G18750.3	Thale cress	nucleus	38.86	36.32
Os11t0658700-01	Rice	nucleus	36.27	35.71
AT2G26320.1	Thale cress	nucleus	9.07	32.11
AT4G37435.1	Thale cress	nucleus	13.21	27.42
Zm00001d048697_P003	Maize	nucleus, plasma membrane, plastid	32.38	25.46
AT1G77950.4	Thale cress	nucleus	15.54	23.81
AT1G77980.1	Thale cress	nucleus	19.95	23.19
AT1G22130.1	Thale cress	nucleus	19.95	22.99

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EntrezGene:814835	ProteinID:AAC32924.2	ProteinID:AEC05661.1	Symbol:AGL30
ArrayExpress:AT2G03060	EnsemblPlantsGene:AT2G03060	RefSeq:AT2G03060	TAIR:AT2G03060	RefSeq:AT2G03060-TAIR-G	EnsemblPlants:AT2G03060.2
TAIR:AT2G03060.2	EMBL:DQ446459	EMBL:DQ652954	GO:GO:0000003	GO:GO:0000982	GO:GO:0000987
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009856	GO:GO:0009987	GO:GO:0010152	GO:GO:0016043	GO:GO:0016049	GO:GO:0030154
GO:GO:0040007	GO:GO:0045944	GO:GO:0046983	GO:GO:0080092	InterPro:IPR002100	InterPro:IPR036879
InterPro:MADS_SRF-like	RefSeq:NP_001318187.1	PFAM:PF00319	PO:PO:0000293	PO:PO:0001017	PO:PO:0007611
PO:PO:0007616	PO:PO:0009032	PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF169	UniProt:Q1PFA4	SMART:SM00432
SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0000D5BC52	SEG:seg	:

Description

AGL30Agamous-like MADS-box protein AGL30 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFA4]

Coordinates

chr2:+:901143..903569

Molecular Weight (calculated)

43791.6 Da

IEP (calculated)

6.903

GRAVY (calculated)

-0.668

Length

386 amino acids

Sequence
(BLAST)

001: MGRVKLKIKK LENTNGRQST FAKRKNGILK KANELSILCD IDIVLLMFSP TGKAAICCGT RSSMEEVIAK FSQVTPQERT KRKFESLENL KKTFQKLDHD
101: VNIREFIASS NSTVEDLSTQ ARILQARISE IHGRLSYWTE PDKINNVEHL GQLEISIRQS LDQLRAHKEH FGQQQQAMQI ENANFVKDWS TCSMQDGIQI
201: PLEQQLQSMS WILNSNTTNI VTEEHNSIPQ REVECSASSS FGSYPGYFGT GKSPEMTIPG QETSFLDELN TGQLKQDTSS QQQFTNNNNI TAYNPNLHND
301: MNHHQTLPPP PLPLTLPHAQ VYIPMNQREY HMNGFFEAPP PDSSAYNDNT NQTRFGSSSS SLPCSISMFD EYLFSQVTKT KLSQRF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.