Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • plastid 1
  • nucleus 5
  • mitochondrion 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr2P01740_001 Banana nucleus 74.12 49.56
GSMUA_Achr3P24170_001 Banana nucleus 75.44 48.18
PGSC0003DMT400050265 Potato nucleus 25.44 40.85
KXG29049 Sorghum nucleus 60.53 36.41
KRH03491 Soybean nucleus 53.51 34.46
VIT_17s0000g06340.t01 Wine grape nucleus 55.26 33.6
TraesCS4B01G150200.1 Wheat nucleus 57.02 33.42
TraesCS4D01G147000.1 Wheat nucleus 57.02 33.42
TraesCS4A01G169000.1 Wheat nucleus 56.58 33.33
HORVU4Hr1G032440.7 Barley nucleus 56.58 33.33
KRH50568 Soybean nucleus 50.88 32.95
Os11t0658700-01 Rice nucleus 56.58 32.91
KRH56901 Soybean nucleus 48.25 32.54
KRG89584 Soybean nucleus 50.0 30.81
CDY58993 Canola nucleus 50.44 30.34
CDY26732 Canola nucleus 49.56 30.05
Bra031049.1-P Field mustard nucleus 50.0 29.84
Bra025685.1-P Field mustard nucleus 48.68 29.29
Bra004393.1-P Field mustard nucleus 44.3 28.94
CDX95922 Canola mitochondrion 44.74 27.95
AT1G69540.2 Thale cress nucleus 44.3 27.52
Bra016544.1-P Field mustard nucleus 36.84 27.45
AT1G18750.3 Thale cress nucleus 49.12 27.12
AT2G03060.2 Thale cress nucleus 44.74 26.42
CDX96703 Canola nucleus 50.0 26.15
Bra017404.1-P Field mustard nucleus 42.98 25.86
CDY40939 Canola golgi, mitochondrion, plasma membrane, plastid 44.3 24.22
Bra024792.1-P Field mustard nucleus 39.91 24.14
CDY45183 Canola nucleus 39.91 24.14
CDY26727 Canola extracellular 21.93 23.92
KRH74891 Soybean endoplasmic reticulum, golgi, mitochondrion, vacuole 39.91 23.64
CDY03021 Canola nucleus 39.47 22.96
CDY60833 Canola nucleus 42.54 22.88
CDX83816 Canola nucleus 50.44 22.2
KRH70750 Soybean nucleus 21.93 22.12
Zm00001d048697_P003 Maize nucleus, plasma membrane, plastid 46.93 21.79
Solyc03g115910.1.1 Tomato plastid 38.16 20.86
CDY17422 Canola nucleus 43.42 20.16
GSMUA_Achr3P04450_001 Banana nucleus 29.39 19.42
GSMUA_Achr9P13010_001 Banana cytosol, nucleus, plasma membrane 29.39 10.53
CDY64870 Canola nucleus 10.96 10.5
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0046983EnsemblPlantsGene:GSMUA_Achr11G14240_001EnsemblPlants:GSMUA_Achr11P14240_001EnsemblPlants:GSMUA_Achr11T14240_001InterPro:IPR002100InterPro:IPR036879
UniProt:M0RS54PFAM:PF00319PRINTS:PR00404PFscan:PS50066PANTHER:PTHR11945PANTHER:PTHR11945:SF169
SMART:SM00432SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfUniParc:UPI00029680D2:
Description
OsMADS68 - MADS-box family gene with MIKC* type-box, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G14240_001]
Coordinates
chr11:-:15301332..15305807
Molecular Weight (calculated)
25973.2 Da
IEP (calculated)
8.604
GRAVY (calculated)
-0.496
Length
228 amino acids
Sequence
(BLAST)
001: MGRVKLKIKR LENSNSRQVT YSKRKIGLTN KAKELSILCD IDLVLLMFAP NGKPTICVGD RSNTEEVVAR FAQVSQQEKG KKACSNSHWL LNKTFKKLDH
101: DVDIQEFLGS STQTVEEITN HWSSLHGQLL DVQKRLSNWA DPDKIDNINH ITTMEQSLKE SLGQIQVHKE NFGKQLISVD YSGQVKCLFS RVLPFKCCEQ
201: GASPVSWLHI NDDQQLMLPQ DANLLPWR
Best Arabidopsis Sequence Match ( AT1G18750.1 )
(BLAST)
001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQVCV FTPPLELSR
Arabidopsis Description
AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.