Factsheet for Bra025685.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26732	Canola	nucleus	97.63	98.4
Bra016544.1-P	Field mustard	nucleus	64.12	79.41
Bra031049.1-P	Field mustard	nucleus	78.89	78.27
AT1G18750.3	Thale cress	nucleus	79.42	72.88
PGSC0003DMT400050265	Potato	nucleus	19.0	50.7
GSMUA_Achr11P...	Banana	nucleus	29.29	48.68
VIT_17s0000g06340.t01	Wine grape	nucleus	47.76	48.27
KRH03491	Soybean	nucleus	41.69	44.63
KRH56901	Soybean	nucleus	38.26	42.9
GSMUA_Achr3P24170_001	Banana	nucleus	39.58	42.02
GSMUA_Achr2P01740_001	Banana	nucleus	36.94	41.06
KXG29049	Sorghum	nucleus	39.58	39.58
Bra004393.1-P	Field mustard	nucleus	33.77	36.68
Bra017404.1-P	Field mustard	nucleus	36.15	36.15
TraesCS4B01G150200.1	Wheat	nucleus	36.94	35.99
TraesCS4D01G147000.1	Wheat	nucleus	36.94	35.99
Os11t0658700-01	Rice	nucleus	36.94	35.71
HORVU4Hr1G032440.7	Barley	nucleus	36.41	35.66
TraesCS4A01G169000.1	Wheat	nucleus	36.41	35.66
Bra024792.1-P	Field mustard	nucleus	34.56	34.75
Bra015645.1-P	Field mustard	nucleus	16.09	29.19
Solyc03g115910.1.1	Tomato	plastid	30.34	27.58
Bra016386.1-P	Field mustard	nucleus	19.79	24.12
Zm00001d048697_P003	Maize	nucleus, plasma membrane, plastid	31.13	24.03
Bra012308.1-P	Field mustard	nucleus	20.84	23.58
Bra011763.1-P	Field mustard	mitochondrion	10.82	23.43
Bra015643.1-P	Field mustard	nucleus	19.53	22.49

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra025685	EnsemblPlants:Bra025685.1	EnsemblPlants:Bra025685.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879
UniProt:M4EA77	PFAM:PF00319	PRINTS:PR00404	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF156
SMART:SM00432	SUPFAM:SSF55455	InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI000253F4C3	SEG:seg

Description

AT1G18750 (E=4e-150) AGL65 | AGL65 (AGAMOUS-LIKE 65); DNA binding / transcription factor

Coordinates

chrA06:+:7279739..7281753

Molecular Weight (calculated)

43182.5 Da

IEP (calculated)

6.075

GRAVY (calculated)

-0.473

Length

379 amino acids

Sequence
(BLAST)

001: MGRVKLEIKR LESTGNRQVT YSKRKCGILK KAKELSILCD IDILLLMFSP TGKPTMLHGQ HSCIEEVISK FAQLTPQERT KSLFVFAQLQ ALKKTFKNLD
101: HDINIPEFLG ARNQTIESLS NQVAIFQAQL MECHRRLSCW TNIDRIENTE HLTLLEESLR KSIERIQFHK EHHGKNQLLP IECTTTQFHS GILPLAMGDN
201: NSMQEAHSMS WLPDKDNQQT ILPGDSSFIP HREMDGSIPV YTNCFFESVK QEDQKCINPG QQFELLGQQG NGFLGLQQIG EEYSYPTPFG TTLGMEEDQE
301: NEIKTEMAFK NLQQQQDPSS MFDPTASSSS CFQIPLDQPM FATDLHHHHQ NWVSGSMFGQ TSYNQVCVSH LTLEISMAI

Best Arabidopsis Sequence Match ( AT1G18750.1 )
(BLAST)

001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQVCV FTPPLELSR

Arabidopsis Description

AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.