Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58993 | Canola | nucleus | 94.24 | 94.99 |
| Bra016544.1-P | Field mustard | nucleus | 69.11 | 86.27 |
| AT1G18750.3 | Thale cress | nucleus | 87.7 | 81.11 |
| Bra025685.1-P | Field mustard | nucleus | 78.27 | 78.89 |
| VIT_17s0000g06340.t01 | Wine grape | nucleus | 50.26 | 51.2 |
| GSMUA_Achr11P... | Banana | nucleus | 29.84 | 50.0 |
| PGSC0003DMT400050265 | Potato | nucleus | 18.32 | 49.3 |
| KRH03491 | Soybean | nucleus | 42.93 | 46.33 |
| KRH56901 | Soybean | nucleus | 39.79 | 44.97 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 40.05 | 44.87 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 41.88 | 44.82 |
| KXG29049 | Sorghum | nucleus | 42.67 | 43.01 |
| Os11t0658700-01 | Rice | nucleus | 40.31 | 39.29 |
| Bra004393.1-P | Field mustard | nucleus | 35.86 | 39.26 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 39.79 | 39.07 |
| TraesCS4D01G147000.1 | Wheat | nucleus | 39.79 | 39.07 |
| Bra017404.1-P | Field mustard | nucleus | 38.48 | 38.79 |
| HORVU4Hr1G032440.7 | Barley | nucleus | 39.27 | 38.76 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 39.27 | 38.76 |
| Bra024792.1-P | Field mustard | nucleus | 37.17 | 37.67 |
| Solyc03g115910.1.1 | Tomato | plastid | 31.94 | 29.26 |
| Bra015645.1-P | Field mustard | nucleus | 15.71 | 28.71 |
| Bra011763.1-P | Field mustard | mitochondrion | 12.04 | 26.29 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 32.98 | 25.66 |
| Bra016386.1-P | Field mustard | nucleus | 20.68 | 25.4 |
| Bra012308.1-P | Field mustard | nucleus | 21.99 | 25.07 |
| Bra015643.1-P | Field mustard | nucleus | 21.47 | 24.92 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra031049 | EnsemblPlants:Bra031049.1 | EnsemblPlants:Bra031049.1-P | ncoils:Coil |
| GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M4EQH8 |
| InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF156 |
| SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0002542A62 | SEG:seg |
Description
AT1G18750 (E=6e-178) AGL65 | AGL65 (AGAMOUS-LIKE 65); DNA binding / transcription factor
Coordinates
chrA09:-:32745794..32747869
Molecular Weight (calculated)
43920.0 Da
IEP (calculated)
6.691
GRAVY (calculated)
-0.773
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVKLKIKR LESTGNRQVT YSKRKSGILK KAKELSILCD IDIVLLMFSP TGKPTVFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHEFLGAR WLKSLLTLTT RQGLSNQVAI FQAQLMECHR RLSCWTNIDR IENTDHLNLL EESLRKSIER IQIHKEHYRN SQLMPIECTT TQFHSGIQLP
201: LEMGGNSSSM QEAHPMSWLP DNDNQQTILP GDSSFLPHRE MDGSIPVYSN CFFESVKQED QICNNPGQTF EQLEQQGNGC LGLQQIGEEY SYPTSFGTSL
301: GMEEDQEKKI KSEMELNNLQ QQQQQQQQDP SSVYDPRANN GGCFRIPHDQ SMFATDHHQH HHHQNWVPDS MLGQTSYSQQ PN
101: VNIHEFLGAR WLKSLLTLTT RQGLSNQVAI FQAQLMECHR RLSCWTNIDR IENTDHLNLL EESLRKSIER IQIHKEHYRN SQLMPIECTT TQFHSGIQLP
201: LEMGGNSSSM QEAHPMSWLP DNDNQQTILP GDSSFLPHRE MDGSIPVYSN CFFESVKQED QICNNPGQTF EQLEQQGNGC LGLQQIGEEY SYPTSFGTSL
301: GMEEDQEKKI KSEMELNNLQ QQQQQQQQDP SSVYDPRANN GGCFRIPHDQ SMFATDHHQH HHHQNWVPDS MLGQTSYSQQ PN
001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEVWIDH LRFMNFLGYF LISLSQIAKV CVNITTRQGL SNQVAIYQAQ LMECHRRLSC WTNIDRIENT EHLDLLEESL RKSIERIQIH
201: KEHYRKNQLL PIECATTQFH SGIQLPMAMG GNSSMQEAHS MSWLPDNDHQ QTILPGDSSF LPHREMDGSI PVYSSCFFES TKPEDQICSN PGQQFEQLEQ
301: QGNGCLGLQQ LGEEYSYPTP FGTTLGMEED QEKKIKSEME LNNLQQQQQQ QQQQQQQDPS MYDPMANNNG GCFQIPHDQS MFVNDHHHHH HHHHQNWVPD
401: SMFGQTSYNQ QPN
101: VNIHDFLGAR NQTIEVWIDH LRFMNFLGYF LISLSQIAKV CVNITTRQGL SNQVAIYQAQ LMECHRRLSC WTNIDRIENT EHLDLLEESL RKSIERIQIH
201: KEHYRKNQLL PIECATTQFH SGIQLPMAMG GNSSMQEAHS MSWLPDNDHQ QTILPGDSSF LPHREMDGSI PVYSSCFFES TKPEDQICSN PGQQFEQLEQ
301: QGNGCLGLQQ LGEEYSYPTP FGTTLGMEED QEKKIKSEME LNNLQQQQQQ QQQQQQQDPS MYDPMANNNG GCFQIPHDQS MFVNDHHHHH HHHHQNWVPD
401: SMFGQTSYNQ QPN
Arabidopsis Description
AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.