Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G032440.7 | Barley | nucleus | 80.47 | 78.81 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 79.42 | 77.78 |
| TraesCS4D01G147000.1 | Wheat | nucleus | 79.42 | 77.38 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 78.89 | 76.86 |
| Os11t0658700-01 | Rice | nucleus | 75.46 | 72.96 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 58.05 | 61.62 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 54.62 | 60.7 |
| GSMUA_Achr11P... | Banana | nucleus | 36.41 | 60.53 |
| VIT_17s0000g06340.t01 | Wine grape | nucleus | 50.92 | 51.47 |
| PGSC0003DMT400050265 | Potato | nucleus | 19.26 | 51.41 |
| KRH03491 | Soybean | nucleus | 47.76 | 51.13 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 65.96 | 50.92 |
| KRH56901 | Soybean | nucleus | 44.59 | 50.0 |
| KRH50568 | Soybean | nucleus | 44.33 | 47.73 |
| KRG89584 | Soybean | nucleus | 42.22 | 43.24 |
| CDY58993 | Canola | nucleus | 43.01 | 43.01 |
| Bra031049.1-P | Field mustard | nucleus | 43.01 | 42.67 |
| CDY26732 | Canola | nucleus | 41.16 | 41.49 |
| Bra016544.1-P | Field mustard | nucleus | 32.45 | 40.2 |
| AT1G18750.3 | Thale cress | nucleus | 43.54 | 39.95 |
| Bra004393.1-P | Field mustard | nucleus | 36.68 | 39.83 |
| Bra025685.1-P | Field mustard | nucleus | 39.58 | 39.58 |
| KRH70750 | Soybean | nucleus | 23.48 | 39.38 |
| Bra024792.1-P | Field mustard | nucleus | 38.26 | 38.46 |
| CDX95922 | Canola | mitochondrion | 36.94 | 38.36 |
| AT2G03060.2 | Thale cress | nucleus | 39.05 | 38.34 |
| CDY45183 | Canola | nucleus | 37.99 | 38.2 |
| AT1G69540.2 | Thale cress | nucleus | 36.68 | 37.87 |
| CDX96703 | Canola | nucleus | 42.74 | 37.16 |
| CDY03021 | Canola | nucleus | 37.73 | 36.48 |
| Bra017404.1-P | Field mustard | nucleus | 36.15 | 36.15 |
| KRH74891 | Soybean | endoplasmic reticulum, golgi, mitochondrion, vacuole | 35.36 | 34.81 |
| CDY40939 | Canola | golgi, mitochondrion, plasma membrane, plastid | 36.68 | 33.33 |
| CDY26727 | Canola | extracellular | 18.21 | 33.01 |
| CDY60833 | Canola | nucleus | 36.15 | 32.31 |
| CDX83816 | Canola | nucleus | 43.8 | 32.05 |
| Solyc03g115910.1.1 | Tomato | plastid | 33.25 | 30.22 |
| CDY17422 | Canola | nucleus | 36.15 | 27.9 |
| KXG19627 | Sorghum | nucleus | 22.96 | 23.32 |
| CDY64870 | Canola | nucleus | 13.72 | 21.85 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | UniProt:A0A1B6PTQ0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | EnsemblPlants:KXG29049 |
| ProteinID:KXG29049 | ProteinID:KXG29049.1 | ProteinID:OQU83955.1 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF169 | SMART:SM00432 | EnsemblPlantsGene:SORBI_3005G204600 | SUPFAM:SSF55455 | InterPro:TF_MADSbox |
| InterPro:TF_MADSbox_sf | UniParc:UPI00081AC0BC | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:69030779..69035776
Molecular Weight (calculated)
41806.3 Da
IEP (calculated)
6.554
GRAVY (calculated)
-0.592
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVKLKIKR LENSSGRQVT YSKRRSGILK KAKELSILCD IDLILLMFSP TGKPTICIGE RSNIEEVIAK YAQLTPQERA KRKLESLEAL KKTFKKLDHD
101: VNIQDFLGSG GQTVEELSGH LGSLQCQMAE VQKRLSYWSD PEKVENIDHI RAMEQSLKES LNRIQIHKEN FAKQHLIGLQ CAAAQFQTDM QLPLGLTGEP
201: GPSSWFQNGG ADGQQAMMLP DDSSLLHQRD IAGCSTSTSL PGYPGYFSMT KQETDTGGGS EHAGQAAVHQ QPPPPPPDFS QAECLTSLHL GAQFPYAPCF
301: DHPSLFNDRM FRPDAVELHD GSAGMDFGGG HFDLPRPGDE ASFQNWASAA ACGAAMFDHH HQQQQHHQQS QSSSAQQQL
101: VNIQDFLGSG GQTVEELSGH LGSLQCQMAE VQKRLSYWSD PEKVENIDHI RAMEQSLKES LNRIQIHKEN FAKQHLIGLQ CAAAQFQTDM QLPLGLTGEP
201: GPSSWFQNGG ADGQQAMMLP DDSSLLHQRD IAGCSTSTSL PGYPGYFSMT KQETDTGGGS EHAGQAAVHQ QPPPPPPDFS QAECLTSLHL GAQFPYAPCF
301: DHPSLFNDRM FRPDAVELHD GSAGMDFGGG HFDLPRPGDE ASFQNWASAA ACGAAMFDHH HQQQQHHQQS QSSSAQQQL
001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQVCV FTPPLELSR
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQVCV FTPPLELSR
Arabidopsis Description
AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.