Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004393.1-P | Field mustard | nucleus | 68.12 | 71.63 |
| CDX95922 | Canola | mitochondrion | 68.39 | 68.77 |
| CDY40939 | Canola | golgi, mitochondrion, plasma membrane, plastid | 67.3 | 59.23 |
| KRH50568 | Soybean | nucleus | 44.41 | 46.31 |
| GSMUA_Achr11P... | Banana | nucleus | 27.52 | 44.3 |
| KRG89584 | Soybean | nucleus | 41.96 | 41.62 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 37.87 | 40.76 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 39.51 | 40.62 |
| AT2G03060.2 | Thale cress | nucleus | 41.69 | 39.64 |
| HORVU4Hr1G032440.7 | Barley | nucleus | 38.96 | 36.95 |
| KXG29049 | Sorghum | nucleus | 37.87 | 36.68 |
| TraesCS4D01G147000.1 | Wheat | nucleus | 38.69 | 36.5 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 38.69 | 36.5 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 38.42 | 36.43 |
| KRH70750 | Soybean | nucleus | 22.07 | 35.84 |
| Os11t0658700-01 | Rice | nucleus | 37.33 | 34.95 |
| KRH74891 | Soybean | endoplasmic reticulum, golgi, mitochondrion, vacuole | 33.24 | 31.69 |
| AT1G18750.3 | Thale cress | nucleus | 34.6 | 30.75 |
| AT2G26320.1 | Thale cress | nucleus | 8.17 | 27.52 |
| AT1G77950.4 | Thale cress | nucleus | 17.44 | 25.4 |
| AT4G37435.1 | Thale cress | nucleus | 12.81 | 25.27 |
| AT1G77980.1 | Thale cress | nucleus | 21.25 | 23.49 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 30.52 | 22.81 |
| AT1G22130.1 | Thale cress | nucleus | 20.44 | 22.39 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:843289 | UniProt:A0A1P8ASZ9 | Symbol:AGL94 | ProteinID:ANM59782.1 |
| ArrayExpress:AT1G69540 | EnsemblPlantsGene:AT1G69540 | RefSeq:AT1G69540 | TAIR:AT1G69540 | RefSeq:AT1G69540-TAIR-G | EnsemblPlants:AT1G69540.2 |
| ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 |
| InterPro:MADS_SRF-like | RefSeq:NP_001322116.1 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF169 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI000848EA60 |
| SEG:seg | : | : | : | : | : |
Description
AGL94AGAMOUS-like 94 [Source:TAIR;Acc:AT1G69540]
Coordinates
chr1:-:26145001..26147751
Molecular Weight (calculated)
41998.4 Da
IEP (calculated)
7.177
GRAVY (calculated)
-0.386
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVKLKIKK LQNMNGRQCT YTKRRHGIMK KAKELSILCD IDVVLLMFSP MGKASICIGK HSIGEVIAKF AQLSPQERAK RKLENLEALR KTFMKANHDI
101: DISKFLDRIS TPTVEVLSEK IRFLQTQLSD IHTRLSYWTD VDNIDSVDVL QQLEHSLRQS LAQIYGRKAS MPQRQQQQLM SSQCKNQLQT EIDIDFGMEM
201: EQQLENFSWV RTDENMNVPI EEEDPNLQLH HMYKDITCSA SSALGNYSGL FSKSSDILQK LETGSIPGTS ADPNQQFSNL SFLNDQKLKQ LAEWNLLGSP
301: ADYYVSQILE ASYKPQIGGK NNGASSETLP YVAVFDDPLY FWVNNGLFII HLFSKLCYYW SCFADCF
101: DISKFLDRIS TPTVEVLSEK IRFLQTQLSD IHTRLSYWTD VDNIDSVDVL QQLEHSLRQS LAQIYGRKAS MPQRQQQQLM SSQCKNQLQT EIDIDFGMEM
201: EQQLENFSWV RTDENMNVPI EEEDPNLQLH HMYKDITCSA SSALGNYSGL FSKSSDILQK LETGSIPGTS ADPNQQFSNL SFLNDQKLKQ LAEWNLLGSP
301: ADYYVSQILE ASYKPQIGGK NNGASSETLP YVAVFDDPLY FWVNNGLFII HLFSKLCYYW SCFADCF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.