Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 5
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX87492 | Canola | nucleus | 71.83 | 79.04 |
| CDX88401 | Canola | nucleus | 75.0 | 77.46 |
| Bra015645.1-P | Field mustard | nucleus | 62.3 | 75.12 |
| TraesCS4A01G290700.1 | Wheat | nucleus | 35.71 | 58.44 |
| VIT_19s0014g00310.t01 | Wine grape | nucleus | 17.86 | 57.69 |
| AT1G77980.1 | Thale cress | nucleus | 63.1 | 47.89 |
| AT1G22130.1 | Thale cress | nucleus | 60.32 | 45.37 |
| KRH16660 | Soybean | nucleus | 51.59 | 37.46 |
| KRH18859 | Soybean | nucleus | 49.6 | 37.43 |
| AT2G26320.1 | Thale cress | nucleus | 15.87 | 36.7 |
| HORVU4Hr1G003610.5 | Barley | nucleus | 41.27 | 34.1 |
| Os08t0494100-02 | Rice | nucleus | 45.24 | 33.83 |
| TraesCS4D01G021100.1 | Wheat | nucleus | 47.22 | 33.71 |
| TraesCS4B01G023300.1 | Wheat | nucleus | 40.48 | 33.12 |
| Zm00001d044850_P001 | Maize | nucleus | 36.51 | 33.09 |
| GSMUA_Achr3P04450_001 | Banana | nucleus | 44.84 | 32.75 |
| Os06t0223300-01 | Rice | nucleus | 46.03 | 32.22 |
| KXG19627 | Sorghum | nucleus | 46.03 | 31.1 |
| Zm00001d037212_P001 | Maize | nucleus | 45.24 | 30.98 |
| AT4G37435.1 | Thale cress | nucleus | 21.83 | 29.57 |
| Solyc05g051830.2.1 | Tomato | nucleus | 34.92 | 22.62 |
| GSMUA_Achr9P13010_001 | Banana | cytosol, nucleus, plasma membrane | 46.43 | 18.4 |
| AT1G69540.2 | Thale cress | nucleus | 25.4 | 17.44 |
| AT1G18750.3 | Thale cress | nucleus | 28.57 | 17.43 |
| AT2G03060.2 | Thale cress | nucleus | 23.81 | 15.54 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:844130 | ProteinID:AEE36050.1 | ProteinID:AEE36051.1 | Symbol:AGL67 |
| ProteinID:ANM60044.1 | ProteinID:ANM60045.1 | ArrayExpress:AT1G77950 | EnsemblPlantsGene:AT1G77950 | RefSeq:AT1G77950 | TAIR:AT1G77950 |
| RefSeq:AT1G77950-TAIR-G | EnsemblPlants:AT1G77950.4 | Unigene:At.34362 | ncoils:Coil | UniProt:F4I8L6 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | RefSeq:NP_001117616.1 | RefSeq:NP_001322357.1 | RefSeq:NP_001322358.1 |
| RefSeq:NP_177918.2 | PFAM:PF00319 | PRINTS:PR00404 | ScanProsite:PS00350 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF154 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00005DC1EE |
| SEG:seg | : | : | : | : | : |
Description
AGL67AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6]
Coordinates
chr1:+:29306905..29310207
Molecular Weight (calculated)
29246.9 Da
IEP (calculated)
5.509
GRAVY (calculated)
-0.779
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVKLELKR IEKSTNRQIT FSKRKKGLIK KAYELSTLCD IDLALLMFSP SDRLCLFSGQ TRIEDVLARY INLPDQEREN AIVFPDQSKR QGIQNKEYLL
101: RTLEKLKIED DMALQINEPR PEATNSNVEE LEQEVCRLQQ QLQISEEELR KFEPDPMRLT SMEEIEACEA NLINTLTRVV QRREHLLRKS CEAQSNQQSM
201: DGILLNDIVE DWGPEPEPKQ AHMIANSAHH SNQPSYDLLL RRSNSSSNQN PK
101: RTLEKLKIED DMALQINEPR PEATNSNVEE LEQEVCRLQQ QLQISEEELR KFEPDPMRLT SMEEIEACEA NLINTLTRVV QRREHLLRKS CEAQSNQQSM
201: DGILLNDIVE DWGPEPEPKQ AHMIANSAHH SNQPSYDLLL RRSNSSSNQN PK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.