Factsheet for Bra015645.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87492	Canola	nucleus	88.52	80.79
CDX88401	Canola	nucleus	85.65	73.36
AT1G77950.4	Thale cress	nucleus	75.12	62.3
VIT_19s0014g00310.t01	Wine grape	nucleus	20.1	53.85
TraesCS4A01G290700.1	Wheat	nucleus	39.23	53.25
Bra012308.1-P	Field mustard	nucleus	62.68	39.1
Bra015643.1-P	Field mustard	nucleus	59.81	37.99
Bra016386.1-P	Field mustard	nucleus	53.59	36.01
KRH18859	Soybean	nucleus	50.72	31.74
KRH16660	Soybean	nucleus	52.63	31.7
Bra011763.1-P	Field mustard	mitochondrion	25.36	30.29
HORVU4Hr1G003610.5	Barley	nucleus	41.15	28.2
TraesCS4D01G021100.1	Wheat	nucleus	47.37	28.05
TraesCS4B01G023300.1	Wheat	nucleus	41.15	27.92
Os08t0494100-02	Rice	nucleus	44.02	27.3
Zm00001d044850_P001	Maize	nucleus	35.89	26.98
GSMUA_Achr3P04450_001	Banana	nucleus	44.02	26.67
Os06t0223300-01	Rice	nucleus	45.45	26.39
KXG19627	Sorghum	nucleus	45.45	25.47
Zm00001d037212_P001	Maize	nucleus	42.11	23.91
Solyc05g051830.2.1	Tomato	nucleus	35.41	19.02
Bra004393.1-P	Field mustard	nucleus	28.23	16.91
Bra016544.1-P	Field mustard	nucleus	24.4	16.67
Bra025685.1-P	Field mustard	nucleus	29.19	16.09
Bra024792.1-P	Field mustard	nucleus	28.71	15.92
Bra031049.1-P	Field mustard	nucleus	28.71	15.71
GSMUA_Achr9P13010_001	Banana	cytosol, nucleus, plasma membrane	45.93	15.09
Bra017404.1-P	Field mustard	nucleus	25.84	14.25

Protein Annotations

MapMan:15.5.14	Gene3D:3.40.1810.10	EnsemblPlantsGene:Bra015645	EnsemblPlants:Bra015645.1	EnsemblPlants:Bra015645.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0046983	InterPro:IPR002100	InterPro:IPR036879	UniProt:M4DGM0	PFAM:PF00319	PRINTS:PR00404
ScanProsite:PS00350	PFscan:PS50066	PANTHER:PTHR11945	PANTHER:PTHR11945:SF154	SMART:SM00432	SUPFAM:SSF55455
InterPro:TF_MADSbox	InterPro:TF_MADSbox_sf	UniParc:UPI0002541B72	SEG:seg	:	:

Description

AT1G77950 (E=4e-077) AGL67 | AGL67 (AGAMOUS-LIKE 67); transcription factor

Coordinates

chrA07:+:21573435..21576199

Molecular Weight (calculated)

24599.5 Da

IEP (calculated)

8.584

GRAVY (calculated)

-0.771

Length

209 amino acids

Sequence
(BLAST)

001: MGRAKLEIKP IQKSTNRQIT YSKRKKGLMK KAYELSTLCD IDLALLMFSP SDRLCLFSSQ TRIEDVLAKY INLPDQEREN AIVFPDRSKR QGIQNKEYLL
101: RTLEQFKTEN DMAFQINEPR HEAIHSDVEE LEKELCRLQQ QLQISEEELR KFEPDPVRFT SMEEMGACEN HLLSTLTRVV QRRVTNTYYT SATSTTLKRG
201: KYNTDFKYN

Best Arabidopsis Sequence Match ( AT1G77950.3 )
(BLAST)

001: MGRVKLELKR IEKSTNRQIT FSKRKKGLIK KAYELSTLCD IDLALLMFSP SDRLCLFSGQ TRIEDVLARY INLPDQEREN AIVFPDQSKR QGIQNKEYLL
101: RTLEKLKIED DMALQINEPR PEATNSNVEE LEQEVCRLQQ QLQISEEELR KFEPDPMRLT SMEEIEACEA NLINTLTRVV QRREHLLRKS CEAQSNQQSM
201: DGILLNDIVE DWGPEPEPKQ AHMIANSAHH SNQPSYDLLL RRSNSSSNQN PK

Arabidopsis Description

AGL67AGAMOUS-like 67 [Source:UniProtKB/TrEMBL;Acc:F4I8L6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.