Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY60833 | Canola | nucleus | 95.51 | 85.38 |
Bra024792.1-P | Field mustard | nucleus | 78.89 | 79.31 |
AT2G03060.2 | Thale cress | nucleus | 79.42 | 77.98 |
CDY17422 | Canola | nucleus | 94.72 | 73.12 |
Bra004393.1-P | Field mustard | nucleus | 41.69 | 45.27 |
GSMUA_Achr11P... | Banana | nucleus | 25.86 | 42.98 |
GSMUA_Achr3P24170_001 | Banana | nucleus | 39.05 | 41.46 |
GSMUA_Achr2P01740_001 | Banana | nucleus | 36.15 | 40.18 |
Bra031049.1-P | Field mustard | nucleus | 38.79 | 38.48 |
Bra025685.1-P | Field mustard | nucleus | 36.15 | 36.15 |
KXG29049 | Sorghum | nucleus | 36.15 | 36.15 |
Bra016544.1-P | Field mustard | nucleus | 28.76 | 35.62 |
TraesCS4B01G150200.1 | Wheat | nucleus | 36.41 | 35.48 |
TraesCS4D01G147000.1 | Wheat | nucleus | 36.15 | 35.22 |
Os11t0658700-01 | Rice | nucleus | 36.41 | 35.2 |
HORVU4Hr1G032440.7 | Barley | nucleus | 35.88 | 35.14 |
TraesCS4A01G169000.1 | Wheat | nucleus | 35.62 | 34.88 |
Bra011763.1-P | Field mustard | mitochondrion | 12.66 | 27.43 |
Bra015645.1-P | Field mustard | nucleus | 14.25 | 25.84 |
Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 30.87 | 23.83 |
Bra016386.1-P | Field mustard | nucleus | 17.68 | 21.54 |
Bra015643.1-P | Field mustard | nucleus | 18.21 | 20.97 |
Bra012308.1-P | Field mustard | nucleus | 18.47 | 20.9 |
Protein Annotations
MapMan:15.5.14 | Gene3D:3.40.1810.10 | EnsemblPlantsGene:Bra017404 | EnsemblPlants:Bra017404.1 | EnsemblPlants:Bra017404.1-P | GO:GO:0000982 |
GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0045944 | GO:GO:0046983 | InterPro:IPR002100 | InterPro:IPR036879 | UniProt:M4DLM3 | InterPro:MADS_SRF-like |
PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF169 | SMART:SM00432 |
SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI00025422B8 | SEG:seg | : |
Description
AT2G03060 (E=7e-133) AGL30 | DNA binding / transcription factor
Coordinates
chrA09:-:15024091..15026086
Molecular Weight (calculated)
42781.6 Da
IEP (calculated)
7.086
GRAVY (calculated)
-0.659
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGFNRMGRV KLKIKKLENT NGRQATFAKR KNGILKKANE LSILCDIDLI LLMFSPGGKA SLCCGRRSSI EEVISKFSQV TPEERTKKKV ESLETLKKTF
101: LKLDHTVNIR ELIASSNSTT EDLSTQASIL QGRISEIHGR LSYWTEVDKI NNVDHLGQLE ISIRQSLDQL RAHKEHLGQQ QQQQAMQIEN ANFVKDWSTC
201: SLQDGIEIPL EQQLQSMSWV LNSDNTTNII TEEHNPIPKR EVECSASSSF GSYPGYFGTG KSSETSFLDE LNTTNGDIKP QLCTNNNIIP YNPNIMQNDI
301: KHHQTYPPPP LPHPPVFNLP VNQREYHMNG FFEAPPQPHG TSAYNNNNNQ ARFGSSSNSL PCSISMLDEY LFSQMQQPN
101: LKLDHTVNIR ELIASSNSTT EDLSTQASIL QGRISEIHGR LSYWTEVDKI NNVDHLGQLE ISIRQSLDQL RAHKEHLGQQ QQQQAMQIEN ANFVKDWSTC
201: SLQDGIEIPL EQQLQSMSWV LNSDNTTNII TEEHNPIPKR EVECSASSSF GSYPGYFGTG KSSETSFLDE LNTTNGDIKP QLCTNNNIIP YNPNIMQNDI
301: KHHQTYPPPP LPHPPVFNLP VNQREYHMNG FFEAPPQPHG TSAYNNNNNQ ARFGSSSNSL PCSISMLDEY LFSQMQQPN
001: MGRVKLKIKK LENTNGRQST FAKRKNGILK KANELSILCD IDIVLLMFSP TGKAAICCGT RSSMEEVIAK FSQVTPQERT KRKFESLENL KKTFQKLDHD
101: VNIREFIASS NSTVEDLSTQ ARILQARISE IHGRLSYWTE PDKINNVEHL GQLEISIRQS LDQLRAHKEH FGQQQQAMQI ENANFVKDWS TCSMQDGIQI
201: PLEQQLQSMS WILNSNTTNI VTEEHNSIPQ REVECSASSS FGSYPGYFGT GKSPEMTIPG QETSFLDELN TGQLKQDTSS QQQFTNNNNI TAYNPNLHND
301: MNHHQTLPPP PLPLTLPHAQ VYIPMNQREY HMNGFFEAPP PDSSAYNDNT NQTRFGSSSS SLPCSISMFD EYLFSQMQQP N
101: VNIREFIASS NSTVEDLSTQ ARILQARISE IHGRLSYWTE PDKINNVEHL GQLEISIRQS LDQLRAHKEH FGQQQQAMQI ENANFVKDWS TCSMQDGIQI
201: PLEQQLQSMS WILNSNTTNI VTEEHNSIPQ REVECSASSS FGSYPGYFGT GKSPEMTIPG QETSFLDELN TGQLKQDTSS QQQFTNNNNI TAYNPNLHND
301: MNHHQTLPPP PLPLTLPHAQ VYIPMNQREY HMNGFFEAPP PDSSAYNDNT NQTRFGSSSS SLPCSISMFD EYLFSQMQQP N
Arabidopsis Description
AGL30Agamous-like MADS-box protein AGL30 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.