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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60833 Canola nucleus 95.51 85.38
Bra024792.1-P Field mustard nucleus 78.89 79.31
AT2G03060.2 Thale cress nucleus 79.42 77.98
CDY17422 Canola nucleus 94.72 73.12
Bra004393.1-P Field mustard nucleus 41.69 45.27
GSMUA_Achr11P... Banana nucleus 25.86 42.98
GSMUA_Achr3P24170_001 Banana nucleus 39.05 41.46
GSMUA_Achr2P01740_001 Banana nucleus 36.15 40.18
Bra031049.1-P Field mustard nucleus 38.79 38.48
Bra025685.1-P Field mustard nucleus 36.15 36.15
KXG29049 Sorghum nucleus 36.15 36.15
Bra016544.1-P Field mustard nucleus 28.76 35.62
TraesCS4B01G150200.1 Wheat nucleus 36.41 35.48
TraesCS4D01G147000.1 Wheat nucleus 36.15 35.22
Os11t0658700-01 Rice nucleus 36.41 35.2
HORVU4Hr1G032440.7 Barley nucleus 35.88 35.14
TraesCS4A01G169000.1 Wheat nucleus 35.62 34.88
Bra011763.1-P Field mustard mitochondrion 12.66 27.43
Bra015645.1-P Field mustard nucleus 14.25 25.84
Zm00001d048697_P003 Maize nucleus, plasma membrane, plastid 30.87 23.83
Bra016386.1-P Field mustard nucleus 17.68 21.54
Bra015643.1-P Field mustard nucleus 18.21 20.97
Bra012308.1-P Field mustard nucleus 18.47 20.9
Protein Annotations
MapMan:15.5.14Gene3D:3.40.1810.10EnsemblPlantsGene:Bra017404EnsemblPlants:Bra017404.1EnsemblPlants:Bra017404.1-PGO:GO:0000982
GO:GO:0000987GO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003700GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0045944GO:GO:0046983InterPro:IPR002100InterPro:IPR036879UniProt:M4DLM3InterPro:MADS_SRF-like
PFAM:PF00319PRINTS:PR00404PFscan:PS50066PANTHER:PTHR11945PANTHER:PTHR11945:SF169SMART:SM00432
SUPFAM:SSF55455InterPro:TF_MADSboxInterPro:TF_MADSbox_sfUniParc:UPI00025422B8SEG:seg:
Description
AT2G03060 (E=7e-133) AGL30 | DNA binding / transcription factor
Coordinates
chrA09:-:15024091..15026086
Molecular Weight (calculated)
42781.6 Da
IEP (calculated)
7.086
GRAVY (calculated)
-0.659
Length
379 amino acids
Sequence
(BLAST)
001: MNGFNRMGRV KLKIKKLENT NGRQATFAKR KNGILKKANE LSILCDIDLI LLMFSPGGKA SLCCGRRSSI EEVISKFSQV TPEERTKKKV ESLETLKKTF
101: LKLDHTVNIR ELIASSNSTT EDLSTQASIL QGRISEIHGR LSYWTEVDKI NNVDHLGQLE ISIRQSLDQL RAHKEHLGQQ QQQQAMQIEN ANFVKDWSTC
201: SLQDGIEIPL EQQLQSMSWV LNSDNTTNII TEEHNPIPKR EVECSASSSF GSYPGYFGTG KSSETSFLDE LNTTNGDIKP QLCTNNNIIP YNPNIMQNDI
301: KHHQTYPPPP LPHPPVFNLP VNQREYHMNG FFEAPPQPHG TSAYNNNNNQ ARFGSSSNSL PCSISMLDEY LFSQMQQPN
Best Arabidopsis Sequence Match ( AT2G03060.3 )
(BLAST)
001: MGRVKLKIKK LENTNGRQST FAKRKNGILK KANELSILCD IDIVLLMFSP TGKAAICCGT RSSMEEVIAK FSQVTPQERT KRKFESLENL KKTFQKLDHD
101: VNIREFIASS NSTVEDLSTQ ARILQARISE IHGRLSYWTE PDKINNVEHL GQLEISIRQS LDQLRAHKEH FGQQQQAMQI ENANFVKDWS TCSMQDGIQI
201: PLEQQLQSMS WILNSNTTNI VTEEHNSIPQ REVECSASSS FGSYPGYFGT GKSPEMTIPG QETSFLDELN TGQLKQDTSS QQQFTNNNNI TAYNPNLHND
301: MNHHQTLPPP PLPLTLPHAQ VYIPMNQREY HMNGFFEAPP PDSSAYNDNT NQTRFGSSSS SLPCSISMFD EYLFSQMQQP N
Arabidopsis Description
AGL30Agamous-like MADS-box protein AGL30 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFA4]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.