Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G147000.1 | Wheat | nucleus | 79.34 | 79.95 |
| HORVU4Hr1G032440.7 | Barley | nucleus | 78.83 | 79.84 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 78.83 | 79.84 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 78.57 | 79.18 |
| KXG29049 | Sorghum | nucleus | 72.96 | 75.46 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 55.36 | 60.78 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 52.55 | 60.41 |
| GSMUA_Achr11P... | Banana | nucleus | 32.91 | 56.58 |
| VIT_17s0000g06340.t01 | Wine grape | nucleus | 48.21 | 50.4 |
| KRH03491 | Soybean | nucleus | 43.37 | 48.02 |
| KRH56901 | Soybean | nucleus | 39.8 | 46.15 |
| KRH50568 | Soybean | nucleus | 40.82 | 45.45 |
| PGSC0003DMT400050265 | Potato | nucleus | 16.33 | 45.07 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 55.36 | 44.2 |
| KRG89584 | Soybean | nucleus | 41.33 | 43.78 |
| CDY58993 | Canola | nucleus | 39.29 | 40.63 |
| Bra031049.1-P | Field mustard | nucleus | 39.29 | 40.31 |
| Bra004393.1-P | Field mustard | nucleus | 35.71 | 40.11 |
| CDY26732 | Canola | nucleus | 37.24 | 38.83 |
| CDX95922 | Canola | mitochondrion | 35.71 | 38.36 |
| AT1G18750.3 | Thale cress | nucleus | 39.54 | 37.53 |
| Bra024792.1-P | Field mustard | nucleus | 35.97 | 37.4 |
| AT1G69540.2 | Thale cress | nucleus | 34.95 | 37.33 |
| KRH70750 | Soybean | nucleus | 21.43 | 37.17 |
| CDY45183 | Canola | nucleus | 35.71 | 37.14 |
| Bra025685.1-P | Field mustard | nucleus | 35.71 | 36.94 |
| Bra016544.1-P | Field mustard | nucleus | 28.57 | 36.6 |
| Bra017404.1-P | Field mustard | nucleus | 35.2 | 36.41 |
| AT2G03060.2 | Thale cress | nucleus | 35.71 | 36.27 |
| CDX96703 | Canola | nucleus | 38.78 | 34.86 |
| CDY03021 | Canola | nucleus | 34.69 | 34.69 |
| KRH74891 | Soybean | endoplasmic reticulum, golgi, mitochondrion, vacuole | 33.42 | 34.03 |
| CDY40939 | Canola | golgi, mitochondrion, plasma membrane, plastid | 35.46 | 33.33 |
| CDY60833 | Canola | nucleus | 34.69 | 32.08 |
| CDY26727 | Canola | extracellular | 17.09 | 32.06 |
| CDX83816 | Canola | nucleus | 39.29 | 29.73 |
| Solyc03g115910.1.1 | Tomato | plastid | 30.1 | 28.3 |
| CDY17422 | Canola | nucleus | 35.2 | 28.11 |
| Os08t0494100-02 | Rice | nucleus | 21.43 | 24.93 |
| Os06t0223300-01 | Rice | nucleus | 21.94 | 23.89 |
| CDY64870 | Canola | nucleus | 12.76 | 21.01 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | EntrezGene:9266716 | UniProt:A0A0P0Y4X8 | ProteinID:BAT15121.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046983 | InterPro:IPR002100 |
| InterPro:IPR036879 | EnsemblPlantsGene:Os11g0658700 | EnsemblPlants:Os11t0658700-01 | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 |
| PANTHER:PTHR11945 | PANTHER:PTHR11945:SF169 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf |
| UniParc:UPI0001C7B149 | SEG:seg | : | : | : | : |
Description
MADS BOX GENE 68MADS box transcription factor, Pollen maturation (Os11t0658700-01);MADS domain transcription factor, pollen maturation (Os11t0658700-02)
Coordinates
chr11:+:26414394..26418426
Molecular Weight (calculated)
43369.4 Da
IEP (calculated)
6.829
GRAVY (calculated)
-0.540
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRVKLKIKK LENSSGRHVT YSKRRSGILK KAKELSILCD IPLILLMFSP NDKPTICVGD HSSIEDVITK YAQQTPQERA KRKLESLEAL KKTFKKLDHD
101: VNIQDFLGSG GQTVEMLIKS IVWQELSSHL GALQCQMADV EKRLSYWSDP EKVENIDHIR AMEQSLKESL NRIRIHKENF AKQHLMSLQC AAAQFQNDMK
201: LPLGLTGDPN TSSWFHGGGG AEAQQPMMLP EDPSLLHQRD IGCSASTSLQ SYPGYFSMGK QSTDNAGGGE QHHHAAVQQQ PEFSQADCLT SLQLGAQFPY
301: PSAFDNAGLL SDRLFDNAAA AAAAMDFGGH YDLPRPGDEA SFQNWASAAC GATMYDHQQQ QQQQQQPAQL PAAATVEAPS FNHPSPHRQL MI
101: VNIQDFLGSG GQTVEMLIKS IVWQELSSHL GALQCQMADV EKRLSYWSDP EKVENIDHIR AMEQSLKESL NRIRIHKENF AKQHLMSLQC AAAQFQNDMK
201: LPLGLTGDPN TSSWFHGGGG AEAQQPMMLP EDPSLLHQRD IGCSASTSLQ SYPGYFSMGK QSTDNAGGGE QHHHAAVQQQ PEFSQADCLT SLQLGAQFPY
301: PSAFDNAGLL SDRLFDNAAA AAAAMDFGGH YDLPRPGDEA SFQNWASAAC GATMYDHQQQ QQQQQQPAQL PAAATVEAPS FNHPSPHRQL MI
001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN
Arabidopsis Description
AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.