Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004393.1-P | Field mustard | nucleus | 95.34 | 99.71 |
| CDY40939 | Canola | golgi, mitochondrion, plasma membrane, plastid | 93.97 | 82.25 |
| AT1G69540.2 | Thale cress | nucleus | 68.77 | 68.39 |
| KRH50568 | Soybean | nucleus | 44.66 | 46.31 |
| GSMUA_Achr11P... | Banana | nucleus | 27.95 | 44.74 |
| CDY24740 | Canola | nucleus | 7.4 | 42.19 |
| KRG89584 | Soybean | nucleus | 42.74 | 42.16 |
| CDX76715 | Canola | nucleus | 7.12 | 40.62 |
| CDY45183 | Canola | nucleus | 41.64 | 40.32 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 36.71 | 39.3 |
| CDY03021 | Canola | nucleus | 42.19 | 39.29 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 37.81 | 38.66 |
| CDY60833 | Canola | nucleus | 43.56 | 37.5 |
| KXG29049 | Sorghum | nucleus | 38.36 | 36.94 |
| HORVU4Hr1G032440.7 | Barley | nucleus | 38.9 | 36.69 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 38.9 | 36.69 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 38.9 | 36.5 |
| TraesCS4D01G147000.1 | Wheat | nucleus | 38.9 | 36.5 |
| CDY58993 | Canola | nucleus | 37.81 | 36.41 |
| CDY11489 | Canola | nucleus | 8.77 | 35.96 |
| Os11t0658700-01 | Rice | nucleus | 38.36 | 35.71 |
| CDY26732 | Canola | nucleus | 36.16 | 35.11 |
| KRH70750 | Soybean | nucleus | 21.64 | 34.96 |
| CDX76718 | Canola | nucleus | 8.77 | 34.78 |
| CDY17422 | Canola | nucleus | 43.56 | 32.38 |
| KRH74891 | Soybean | endoplasmic reticulum, golgi, mitochondrion, vacuole | 33.7 | 31.95 |
| CDX96703 | Canola | nucleus | 36.44 | 30.5 |
| CDX87492 | Canola | nucleus | 16.99 | 27.07 |
| CDX76713 | Canola | nucleus | 10.68 | 26.53 |
| CDY26727 | Canola | extracellular | 15.07 | 26.32 |
| CDX83816 | Canola | nucleus | 36.71 | 25.87 |
| CDX88401 | Canola | nucleus | 16.71 | 25.0 |
| CDX76717 | Canola | nucleus | 11.78 | 24.29 |
| CDY01295 | Canola | nucleus | 19.73 | 23.15 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 29.59 | 22.0 |
| CDX69305 | Canola | nucleus | 12.05 | 21.67 |
| CDX88402 | Canola | nucleus | 19.18 | 21.28 |
| CDY41491 | Canola | nucleus | 19.45 | 21.01 |
| CDX87489 | Canola | nucleus | 18.9 | 20.97 |
| CDY00423 | Canola | nucleus | 19.18 | 20.9 |
| CDX91664 | Canola | nucleus | 19.18 | 20.71 |
| CDY64870 | Canola | nucleus | 9.86 | 15.13 |
Protein Annotations
| MapMan:15.5.14 | Gene3D:3.40.1810.10 | GO:A0A078E465 | EnsemblPlants:CDX95922 | ProteinID:CDX95922 | ProteinID:CDX95922.1 |
| ncoils:Coil | GO:GO:0000982 | GO:GO:0000987 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0045944 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00101933001 | InterPro:IPR002100 |
| InterPro:IPR036879 | InterPro:MADS_SRF-like | PFAM:PF00319 | PRINTS:PR00404 | PFscan:PS50066 | PANTHER:PTHR11945 |
| PANTHER:PTHR11945:SF169 | SMART:SM00432 | SUPFAM:SSF55455 | InterPro:TF_MADSbox | InterPro:TF_MADSbox_sf | UniParc:UPI0004EF247F |
| SEG:seg | : | : | : | : | : |
Description
BnaA07g28090D
Coordinates
chrLK031892:+:84055..86569
Molecular Weight (calculated)
42084.3 Da
IEP (calculated)
6.718
GRAVY (calculated)
-0.513
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRSIPHIRL KESLFLMGRV KLKIKKLDSI NARQATYCKR KNGIMKKAKE LSILCDIDVV LLMFSPAGKP SLCTGEHSIG EVIAKFSQLA PQERAKRKLD
101: NLEALKKTFM KLDHDVNISE FLERSKPTVE VVSEQVRFLQ KHLSEIHTRL SYWTEVEKVD SIDDLQQLEN SIRQSLYQIR VHKENVLQHQ QQQLMSIECK
201: NELQSDIDLD FGIDIEQQLE NFSWVRTDEN MKAPLKEEED PNLQFYHTYK ELTCSASSSL ESYSGLFGIK TPKLETGSIP GTSVDPNLQY SNLSFLNDPK
301: LQQLAEWNLL GSPADYYVSQ ILEASYRPQF GGNWPSSEMS NYPFTVFDDP LLSRVKQRFC SSSQF
101: NLEALKKTFM KLDHDVNISE FLERSKPTVE VVSEQVRFLQ KHLSEIHTRL SYWTEVEKVD SIDDLQQLEN SIRQSLYQIR VHKENVLQHQ QQQLMSIECK
201: NELQSDIDLD FGIDIEQQLE NFSWVRTDEN MKAPLKEEED PNLQFYHTYK ELTCSASSSL ESYSGLFGIK TPKLETGSIP GTSVDPNLQY SNLSFLNDPK
301: LQQLAEWNLL GSPADYYVSQ ILEASYRPQF GGNWPSSEMS NYPFTVFDDP LLSRVKQRFC SSSQF
001: MGRVKLKIKK LQNMNGRQCT YTKRRHGIMK KAKELSILCD IDVVLLMFSP MGKASICIGK HSIGEVIAKF AQLSPQERAK RKLENLEALR KTFMKANHDI
101: DISKFLDRIS TPTVEVLSEK IRFLQTQLSD IHTRLSYWTD VDNIDSVDVL QQLEHSLRQS LAQIYGRKAS MPQRQQQQLM SSQCKNQLQT EIDIDFGMEM
201: EQQLENFSWV RTDENMNVPI EEEDPNLQLH HMYKDITCSA SSALGNYSGL FSKSSDILQK LETGSIPGTS ADPNQQFSNL SFLNDQKLKQ LAEWNLLGSP
301: ADYYVSQILE ASYKPQIGGK NNGASSETLP YVAVFDDPLY FWPN
101: DISKFLDRIS TPTVEVLSEK IRFLQTQLSD IHTRLSYWTD VDNIDSVDVL QQLEHSLRQS LAQIYGRKAS MPQRQQQQLM SSQCKNQLQT EIDIDFGMEM
201: EQQLENFSWV RTDENMNVPI EEEDPNLQLH HMYKDITCSA SSALGNYSGL FSKSSDILQK LETGSIPGTS ADPNQQFSNL SFLNDQKLKQ LAEWNLLGSP
301: ADYYVSQILE ASYKPQIGGK NNGASSETLP YVAVFDDPLY FWPN
Arabidopsis Description
AGL94AGAMOUS-like 94 [Source:TAIR;Acc:AT1G69540]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.