Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58993 | Canola | nucleus | 68.42 | 37.73 |
| CDY26732 | Canola | nucleus | 64.59 | 35.9 |
| CDY64870 | Canola | nucleus | 36.84 | 32.35 |
| CDX96703 | Canola | nucleus | 64.11 | 30.73 |
| CDX83816 | Canola | nucleus | 62.68 | 25.29 |
| GSMUA_Achr11P... | Banana | nucleus | 23.92 | 21.93 |
| KRH03491 | Soybean | nucleus | 33.49 | 19.77 |
| GSMUA_Achr3P24170_001 | Banana | nucleus | 33.01 | 19.33 |
| GSMUA_Achr2P01740_001 | Banana | nucleus | 30.14 | 18.48 |
| KXG29049 | Sorghum | nucleus | 33.01 | 18.21 |
| Os11t0658700-01 | Rice | nucleus | 32.06 | 17.09 |
| HORVU4Hr1G032440.7 | Barley | nucleus | 31.58 | 17.05 |
| TraesCS4A01G169000.1 | Wheat | nucleus | 31.58 | 17.05 |
| TraesCS4B01G150200.1 | Wheat | nucleus | 31.58 | 16.97 |
| TraesCS4D01G147000.1 | Wheat | nucleus | 31.58 | 16.97 |
| KRH56901 | Soybean | nucleus | 27.27 | 16.86 |
| CDY45183 | Canola | nucleus | 29.19 | 16.18 |
| CDY03021 | Canola | nucleus | 29.19 | 15.56 |
| CDX95922 | Canola | mitochondrion | 26.32 | 15.07 |
| CDY60833 | Canola | nucleus | 26.79 | 13.21 |
| CDY40939 | Canola | golgi, mitochondrion, plasma membrane, plastid | 25.84 | 12.95 |
| CDY17422 | Canola | nucleus | 26.79 | 11.41 |
| CDX87492 | Canola | nucleus | 10.53 | 9.61 |
| CDY24740 | Canola | nucleus | 2.87 | 9.38 |
| CDX76715 | Canola | nucleus | 2.87 | 9.38 |
| CDY01295 | Canola | nucleus | 13.88 | 9.32 |
| Zm00001d048697_P003 | Maize | nucleus, plasma membrane, plastid | 21.53 | 9.16 |
| CDY00423 | Canola | nucleus | 13.88 | 8.66 |
| CDX88401 | Canola | nucleus | 10.05 | 8.61 |
| CDY41491 | Canola | nucleus | 13.88 | 8.58 |
| CDX88402 | Canola | nucleus | 12.92 | 8.21 |
| CDX87489 | Canola | nucleus | 12.92 | 8.21 |
| CDX91664 | Canola | nucleus | 12.92 | 7.99 |
| CDX76718 | Canola | nucleus | 3.35 | 7.61 |
| CDX76713 | Canola | nucleus | 5.26 | 7.48 |
| CDX76717 | Canola | nucleus | 5.74 | 6.78 |
| CDY11489 | Canola | nucleus | 2.87 | 6.74 |
| CDX69305 | Canola | nucleus | 5.26 | 5.42 |
Protein Annotations
| EnsemblPlants:CDY26727 | EnsemblPlantsGene:GSBRNA2T00035633001 | PANTHER:PTHR11945 | PANTHER:PTHR11945:SF156 | ProteinID:CDY26727 | ProteinID:CDY26727.1 |
| SignalP:SignalP-noTM | UniParc:UPI0004EDFCC8 | UniProt:A0A078GNF7 | MapMan:35.1 | : | : |
Description
BnaA06g12950DBnaA06g12950D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNF7]
Coordinates
chrLK032193:-:351633..352970
Molecular Weight (calculated)
24403.2 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.442
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MNVFVSYLSL ILFSPLQALK KTFKKLDHDV NIHEFLGARN QTIKGRSNHV AIFQAQLMEF HRTSVGFFTL QEHYGKNQLL PIECITTQFQ SRIQLPLVMG
101: GNNAMQEAHS MTWLPDNSNQ QTILHGDFSF LPNREIDGSF TVYSDCFFES VKQEDQKCNK PGQKFEQFEQ QGDGCLGFEY IGEEYLYPTH LVLLLEWKKV
201: KRREKLKWN
101: GNNAMQEAHS MTWLPDNSNQ QTILHGDFSF LPNREIDGSF TVYSDCFFES VKQEDQKCNK PGQKFEQFEQ QGDGCLGFEY IGEEYLYPTH LVLLLEWKKV
201: KRREKLKWN
001: MGRVKLKIKR LESTSNRQVT YTKRKNGILK KAKELSILCD IDIVLLMFSP TGRATAFHGE HSCIEEVISK FAQLTPQERT KRKLESLEAL KKTFKKLDHD
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN
101: VNIHDFLGAR NQTIEGLSNQ VAIYQAQLME CHRRLSCWTN IDRIENTEHL DLLEESLRKS IERIQIHKEH YRKNQLLPIE CATTQFHSGI QLPMAMGGNS
201: SMQEAHSMSW LPDNDHQQTI LPGDSSFLPH REMDGSIPVY SSCFFESTKP EDQICSNPGQ QFEQLEQQGN GCLGLQQLGE EYSYPTPFGT TLGMEEDQEK
301: KIKSEMELNN LQQQQQQQQQ QQQQDPSMYD PMANNNGGCF QIPHDQSMFV NDHHHHHHHH HQNWVPDSMF GQTSYNQQPN
Arabidopsis Description
AGL65AGAMOUS-like 65 [Source:TAIR;Acc:AT1G18750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.